rewirebio.iobenchmarks
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Result

AUROC of NT-v2 on Human 5mC

0.738 AUROC

Methods

Tested configuration
NT-v2
Task
Human 5mC detection
Dataset
Human 5mC
Related family profiles
Nucleotide Transformer
Procedure
Binary epigenetic-modification classification as reported in the paper.
Evaluation
NT-v2: Human 5mC detection
Coverage
Not reported scored / Not reported eligible
Uncertainty
Not yet extracted
Evidence
Independent external evaluation · source checkedBenchmarking DNA foundation models for genomic and genetic tasks · Table 3, Human 5mC row, NT-v2 column

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split
Not reported
Adaptation
Not reported
Scoring implementation
Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statementOriginal source and locationReview and provenance
Printed value
0.7377
Individual claims		Benchmarking DNA foundation models for genomic and genetic tasks

Original source ↗

Table 3, Human 5mC row, NT-v2 column

Version: PMC12663285.1
Retrieved: 2026-09-16T10:33:35.327Z

source checked

["independent-cell-check"] · 2026-09-16T10:33:35.327Z

independent paper

Audit details

Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness.

Field: attributes.printed_value

Claim: claim-lit-002

Source artifact SHA-256: 5d8ca9bcf88cc1b38ad667906a2e4699b1aefa6d31c6f49259784930353f3202

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Extraction artifact SHA-256: 5d8ca9bcf88cc1b38ad667906a2e4699b1aefa6d31c6f49259784930353f3202

Extraction artifact

How to read the evidence

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: lit-002

areas
dna-genomes
tasks
Human 5mC detection
printed value
0.7377
numeric value
0.7377
metric
auroc
metric direction
unknown
unit
unitless
source locator
Table 3, Human 5mC row, NT-v2 column
review
method: independent-cell-check; reviewer: rewire-deterministic-table-checker; reviewed at: 2026-09-16T10:33:35.327Z; evidence: Table 3, Human 5mC row, NT-v2 column; cell: 0.7377; artifact sha256: 5d8ca9bcf88cc1b38ad667906a2e4699b1aefa6d31c6f49259784930353f3202; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12663285/fullTextXML; method note: primary XML source; exact label and cell match; reviewer note: version v1; note: Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness.
legacy id
lit-002
missing metadata
dataset version: reason: unextracted; model version: reason: unextracted; split: reason: unextracted; uncertainty: reason: unextracted
Related records

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