rewirebio.iobenchmarks
Dataset

NT benchmark, all 18 tasks

All 18 Nucleotide Transformer downstream tasks.

Evaluation results

25 evaluations · 25 results. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: Nucleotide Transformer 2.5B-parameter models, IA3 fine-tuning (Dalla-Torre et al. 2025)Protocol: Nucleotide Transformer IA3 fine-tuning run time (Dalla-Torre et al. 2025 Methods 'Hardware')
Dataset: NT benchmark, all 18 tasks
50 Runtime (Mean wall time per IA3 fine-tuning run)
minute · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT 2.5B-parameter models IA3 fine-tuning run time (Dalla-Torre et al. 2025)

gfm-guide-20261014-protocol-nt-ia3-finetune-runtime

Aggregation: Not reported

Nucleotide Transformer: building and evaluating robust foundation models for human genomics (Nature Methods) · Methods, 'Data preparation > Hardware', paragraph 1: 'On average, a fine-tuning run lasted 20 min for the 500M-parameter models and 50 min for the 2.5B-parameter models.'
Configuration: Nucleotide Transformer 500M-parameter models, IA3 fine-tuning (Dalla-Torre et al. 2025)Protocol: Nucleotide Transformer IA3 fine-tuning run time (Dalla-Torre et al. 2025 Methods 'Hardware')
Dataset: NT benchmark, all 18 tasks
20 Runtime (Mean wall time per IA3 fine-tuning run)
minute · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT 500M-parameter models IA3 fine-tuning run time (Dalla-Torre et al. 2025)

gfm-guide-20261014-protocol-nt-ia3-finetune-runtime

Aggregation: Not reported

Nucleotide Transformer: building and evaluating robust foundation models for human genomics (Nature Methods) · Methods, 'Data preparation > Hardware', paragraph 1: 'On average, a fine-tuning run lasted 20 min for the 500M-parameter models and 50 min for the 2.5B-parameter models.'
Configuration: BPNet (large), trained from scratch (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.683 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

BPNet (large) (control) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'BPNet (large)', approach 'control', column 'Average performance'
Configuration: BPNet (original), trained from scratch (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.665 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

BPNet (original) (control) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'BPNet (original)', approach 'control', column 'Average performance'
Configuration: BPNet (X-large), trained from scratch (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.566 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

BPNet (X-large) (control) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'BPNet (X-large)', approach 'control', column 'Average performance'
Configuration: DNABERT-1, fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.511 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

DNABERT-1 (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'DNABERT-1', approach 'Finetuning', column 'Average performance'
Configuration: DNABERT-2, parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.723 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

DNABERT-2 (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'DNABERT-2', approach 'Finetuning', column 'Average performance'
Configuration: Enformer, parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.684 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

Enformer (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'Enformer', approach 'Finetuning', column 'Average performance'
Configuration: HyenaDNA-1KB, parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.668 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

HyenaDNA-1KB (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'HyenaDNA-1KB', approach 'Finetuning', column 'Average performance'
Configuration: HyenaDNA-32KB, parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.691 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

HyenaDNA-32KB (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'HyenaDNA-32KB', approach 'Finetuning', column 'Average performance'
Configuration: NT-1000G (2.5B), parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.738 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-1000G (2.5B) (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-1000G (2.5B)', approach 'Finetuning', column 'Average performance'
Configuration: NT-1000G (2.5B), probing (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.613 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-1000G (2.5B) (Probing) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-1000G (2.5B)', approach 'Probing', column 'Average performance'
Configuration: NT-1000G (500M), parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.729 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-1000G (500M) (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-1000G (500M)', approach 'Finetuning', column 'Average performance'
Configuration: NT-1000G (500M), probing (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.583 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-1000G (500M) (Probing) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-1000G (500M)', approach 'Probing', column 'Average performance'
Configuration: NT 2.5B Randomly Initialized, trained from scratch (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.399 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT 2.5B Randomly Initialized (Training from scratch) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT 2.5B Randomly Initialized', approach 'Training from scratch', column 'Average performance'
Configuration: NT 500M Randomly Initialized, trained from scratch (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.355 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT 500M Randomly Initialized (Training from scratch) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT 500M Randomly Initialized', approach 'Training from scratch', column 'Average performance'
Configuration: NT-HumanRef (500M), parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.733 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-HumanRef (500M) (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-HumanRef (500M)', approach 'Finetuning', column 'Average performance'
Configuration: NT-HumanRef (500M), probing (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.534 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-HumanRef (500M) (Probing) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-HumanRef (500M)', approach 'Probing', column 'Average performance'
Configuration: NT-Multispecies (2.5B), parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.755 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-Multispecies (2.5B) (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-Multispecies (2.5B)', approach 'Finetuning', column 'Average performance'
Configuration: NT-Multispecies (2.5B), probing (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.644 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-Multispecies (2.5B) (Probing) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-Multispecies (2.5B)', approach 'Probing', column 'Average performance'
Configuration: NT-Multispecies-v2 (100M), parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.748 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-Multispecies-v2 (100M) (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-Multispecies-v2 (100M)', approach 'Finetuning', column 'Average performance'
Configuration: NT-Multispecies-v2 (250M), parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.769 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-Multispecies-v2 (250M) (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-Multispecies-v2 (250M)', approach 'Finetuning', column 'Average performance'
Configuration: NT-Multispecies-v2 (500M), parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.762 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-Multispecies-v2 (500M) (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-Multispecies-v2 (500M)', approach 'Finetuning', column 'Average performance'
Configuration: NT-Multispecies-v2 (50M), parameter-efficient fine-tuning (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.732 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

NT-Multispecies-v2 (50M) (Finetuning) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'NT-Multispecies-v2 (50M)', approach 'Finetuning', column 'Average performance'
Configuration: Raw Probe, probing of raw sequence (NT benchmark)Protocol: NT benchmark normalised summed performance (Supplementary Table 9)
Dataset: NT benchmark, all 18 tasks
0.391 MCC (mean over three task categories of median cross-validation MCC)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Raw Probe (Probing) NT benchmark normalised summed performance

lit-genomics-20261011-ntbench-protocol-normalised-summed-performance

Aggregation: Not reported

Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12) · Supplementary Table 9, row 'Raw Probe', approach 'Probing', column 'Average performance'

Source checking is not independent reproduction. Release 2026-10-22-1b7cf027e4f6.

Research readiness

0 of 4 readiness checks met. These checks assess whether the evidence supports a reproducible investigation; a source-checked score alone does not meet them.

Readiness checks, gaps and artifacts

Release 2026-10-22-1b7cf027e4f6 · Evidence verified: Not verified

Evidence incomplete

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  • Predictions are matched to the right samples: not yet verified
  • Score meaning and direction are confirmed: not yet verified
  • Metrics are recomputed from the saved predictions: not yet verified

Verified: Not verified

Evidence incomplete

Investigate discrepancies

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Missing or unresolved evidence

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  • File checksums match the recorded files: not yet verified
  • Predictions are matched to the right samples: not yet verified
  • Score meaning and direction are confirmed: not yet verified
  • Metrics are recomputed from the saved predictions: not yet verified
  • Sample annotations are recorded: not yet verified
  • Dependence between samples is assessed: not yet verified

Verified: Not verified

Evidence incomplete

Run locally

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Missing or unresolved evidence

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  • File checksums match the recorded files: not yet verified
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Verified: Not verified

Evidence incomplete

Validate independently

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Missing or unresolved evidence

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  • File checksums match the recorded files: not yet verified
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  • Score meaning and direction are confirmed: not yet verified
  • Independent validation data exist: not yet verified
  • Overlap with training data is checked: not yet verified

Verified: Not verified

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Dataset and evaluation context

A dataset supplies biological observations. The evaluation protocol defines how those observations are split, used and scored.

Evidence

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Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

6 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-22-1b7cf027e4f6
Property and statementOriginal source and locationReview and provenance
Population
18 human tasks in three categories: chromatin profiles, regulatory elements, splicing
Context-only references
Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12)

Original source ↗

Supplementary Table 9 caption

Version: Nature Methods 22, 287-297 (published online 2024-11-28); Supplementary Information PDF (MOESM1, 25 pages)
Retrieved: 2026-10-11T01:37:37Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.population

Source artifact SHA-256: ef0f357a1289aad1910059d455579e242a9a82ab3e32ec38d8ea2584effc436e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Source location
Supplementary Table 9 caption
Context-only references
Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12)

Original source ↗

Supplementary Table 9 caption

Version: Nature Methods 22, 287-297 (published online 2024-11-28); Supplementary Information PDF (MOESM1, 25 pages)
Retrieved: 2026-10-11T01:37:37Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: ef0f357a1289aad1910059d455579e242a9a82ab3e32ec38d8ea2584effc436e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Split
Tenfold cross-validation
Context-only references
Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12)

Original source ↗

Supplementary Table 9 caption

Version: Nature Methods 22, 287-297 (published online 2024-11-28); Supplementary Information PDF (MOESM1, 25 pages)
Retrieved: 2026-10-11T01:37:37Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.split

Source artifact SHA-256: ef0f357a1289aad1910059d455579e242a9a82ab3e32ec38d8ea2584effc436e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Description
All 18 Nucleotide Transformer downstream tasks.
Context-only references
Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12)

Original source ↗

Supplementary Table 9 caption

Version: Nature Methods 22, 287-297 (published online 2024-11-28); Supplementary Information PDF (MOESM1, 25 pages)
Retrieved: 2026-10-11T01:37:37Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: ef0f357a1289aad1910059d455579e242a9a82ab3e32ec38d8ea2584effc436e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: same data as
gfm2-20261011-datta2026-data-nt-benchmark
Context-only references
Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12)

Original source ↗

Supplementary Table 9 caption

Version: Nature Methods 22, 287-297 (published online 2024-11-28); Supplementary Information PDF (MOESM1, 25 pages)
Retrieved: 2026-10-11T01:37:37Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:same_data_as:gfm2-20261011-datta2026-data-nt-benchmark

Source artifact SHA-256: ef0f357a1289aad1910059d455579e242a9a82ab3e32ec38d8ea2584effc436e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Name
NT benchmark, all 18 tasks
Context-only references
Nucleotide Transformer: Supplementary Information (Supplementary Tables 1-12)

Original source ↗

Supplementary Table 9 caption

Version: Nature Methods 22, 287-297 (published online 2024-11-28); Supplementary Information PDF (MOESM1, 25 pages)
Retrieved: 2026-10-11T01:37:37Z

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: ef0f357a1289aad1910059d455579e242a9a82ab3e32ec38d8ea2584effc436e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Sources and history

Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: lit-genomics-20261011-ntbench-data-all-18-tasks

areas
dna-genomes
contexts
research
population
18 human tasks in three categories: chromatin profiles, regulatory elements, splicing
split
Tenfold cross-validation
source locator
Supplementary Table 9 caption
missing metadata
version: reason: unreported
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