Dataset

LRB Variant Effect OMIM test set (GFMBench-API)

LRB Variant Effect OMIM evaluation data as packaged in GFMBench-API.

Evaluation results

10 evaluations · 40 results. Different protocols are not a single leaderboard.

Filter evaluations

Tested model or methodProtocolDatasetEvaluation setupMetricEvidence origin

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: Caduceus-Ps (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0019 AUPRC (zero-shot; cosine similarity of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Caduceus-Ps on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'Caduceus-Ps', column 'Cos AUPRC'
Configuration: Caduceus-Ps (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.486 AUROC (zero-shot; cosine similarity of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Caduceus-Ps on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'Caduceus-Ps', column 'Cos AUROC'
Configuration: Caduceus-Ps (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0019 AUPRC (zero-shot; L2 distance of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Caduceus-Ps on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'Caduceus-Ps', column 'L2 AUPRC'
Configuration: Caduceus-Ps (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.49 AUROC (zero-shot; L2 distance of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Caduceus-Ps on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'Caduceus-Ps', column 'L2 AUROC'
Configuration: Caduceus-Ps (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0022 AUPRC (zero-shot; cosine similarity of embeddings at the SNV position) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Caduceus-Ps on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'Caduceus-Ps', column 'SNV Cos AUPRC'
Configuration: Caduceus-Ps (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.524 AUROC (zero-shot; cosine similarity of embeddings at the SNV position) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Caduceus-Ps on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'Caduceus-Ps', column 'SNV Cos AUROC'
Configuration: Caduceus-Ps (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-mlm-llr Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0016 AUPRC (zero-shot; masked log-likelihood ratio) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Caduceus-Ps on GFMBench-API LRB Variant Effect OMIM (zs-mlm-llr) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-mlm-llr Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 4, task 'LRB Variant Effect OMIM', row 'Caduceus-Ps', column 'Msk LLR PRC'
Configuration: Caduceus-Ps (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-mlm-llr Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.41 AUROC (zero-shot; masked log-likelihood ratio) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Caduceus-Ps on GFMBench-API LRB Variant Effect OMIM (zs-mlm-llr) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-mlm-llr Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 4, task 'LRB Variant Effect OMIM', row 'Caduceus-Ps', column 'Msk LLR ROC'
Configuration: DNA-BERT (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0021 AUPRC (zero-shot; cosine similarity of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNA-BERT on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNA-BERT', column 'Cos AUPRC'
Configuration: DNA-BERT (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.514 AUROC (zero-shot; cosine similarity of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNA-BERT on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNA-BERT', column 'Cos AUROC'
Configuration: DNA-BERT (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0021 AUPRC (zero-shot; L2 distance of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNA-BERT on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNA-BERT', column 'L2 AUPRC'
Configuration: DNA-BERT (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.514 AUROC (zero-shot; L2 distance of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNA-BERT on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNA-BERT', column 'L2 AUROC'
Configuration: DNA-BERT (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0027 AUPRC (zero-shot; cosine similarity of embeddings at the SNV position) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNA-BERT on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNA-BERT', column 'SNV Cos AUPRC'
Configuration: DNA-BERT (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.563 AUROC (zero-shot; cosine similarity of embeddings at the SNV position) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNA-BERT on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNA-BERT', column 'SNV Cos AUROC'
Configuration: DNA-BERT (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-mlm-llr Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0021 AUPRC (zero-shot; masked log-likelihood ratio) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNA-BERT on GFMBench-API LRB Variant Effect OMIM (zs-mlm-llr) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-mlm-llr Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 4, task 'LRB Variant Effect OMIM', row 'DNA-BERT', column 'Msk LLR PRC'
Configuration: DNA-BERT (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-mlm-llr Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.522 AUROC (zero-shot; masked log-likelihood ratio) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNA-BERT on GFMBench-API LRB Variant Effect OMIM (zs-mlm-llr) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-mlm-llr Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 4, task 'LRB Variant Effect OMIM', row 'DNA-BERT', column 'Msk LLR ROC'
Configuration: DNABERT-2 (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0021 AUPRC (zero-shot; cosine similarity of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNABERT-2 on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNABERT-2', column 'Cos AUPRC'
Configuration: DNABERT-2 (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.512 AUROC (zero-shot; cosine similarity of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNABERT-2 on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNABERT-2', column 'Cos AUROC'
Configuration: DNABERT-2 (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0022 AUPRC (zero-shot; L2 distance of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNABERT-2 on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNABERT-2', column 'L2 AUPRC'
Configuration: DNABERT-2 (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.531 AUROC (zero-shot; L2 distance of reference and alternate sequence embeddings) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNABERT-2 on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNABERT-2', column 'L2 AUROC'
Configuration: DNABERT-2 (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0019 AUPRC (zero-shot; cosine similarity of embeddings at the SNV position) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNABERT-2 on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNABERT-2', column 'SNV Cos AUPRC'
Configuration: DNABERT-2 (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-embedding Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.505 AUROC (zero-shot; cosine similarity of embeddings at the SNV position) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNABERT-2 on GFMBench-API LRB Variant Effect OMIM (zs-embedding) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-embedding Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 3, task 'LRB Variant Effect OMIM', row 'DNABERT-2', column 'SNV Cos AUROC'
Configuration: DNABERT-2 (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-mlm-llr Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0019 AUPRC (zero-shot; masked log-likelihood ratio) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNABERT-2 on GFMBench-API LRB Variant Effect OMIM (zs-mlm-llr) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-mlm-llr Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 4, task 'LRB Variant Effect OMIM', row 'DNABERT-2', column 'Msk LLR PRC'
Configuration: DNABERT-2 (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-mlm-llr Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.477 AUROC (zero-shot; masked log-likelihood ratio) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DNABERT-2 on GFMBench-API LRB Variant Effect OMIM (zs-mlm-llr) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-mlm-llr Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 4, task 'LRB Variant Effect OMIM', row 'DNABERT-2', column 'Msk LLR ROC'
Configuration: Evo2 (zero-shot, GFMBench-API)	Protocol: GFMBench-API LRB Variant Effect OMIM, zs-ar-llr Dataset: LRB Variant Effect OMIM test set (GFMBench-API)	0.0024 AUPRC (zero-shot; autoregressive log-likelihood ratio over mean token probabilities) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Evo2 on GFMBench-API LRB Variant Effect OMIM (zs-ar-llr) lit-genomics-20261011-gfmbench-protocol-lrb-variant-effect-omim-zs-ar-llr Aggregation: Not reported GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Table 5, task 'LRB Variant Effect OMIM', row 'Evo2', column 'Mean LLR PRC'

Source checking is not independent reproduction. Release 2026-10-22-1b7cf027e4f6.

Research readiness

0 of 4 readiness checks met. These checks assess whether the evidence supports a reproducible investigation; a source-checked score alone does not meet them.

Readiness checks, gaps and artifacts

Release 2026-10-22-1b7cf027e4f6 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

Exact outcomes, predictions, identifiers and evaluator are connected.

Missing or unresolved evidence

No verified artifact manifest is linked to this exact record.
File checksums match the recorded files: not yet verified
Predictions are matched to the right samples: not yet verified
Score meaning and direction are confirmed: not yet verified
Metrics are recomputed from the saved predictions: not yet verified

Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

No verified artifact manifest is linked to this exact record.
File checksums match the recorded files: not yet verified
Predictions are matched to the right samples: not yet verified
Score meaning and direction are confirmed: not yet verified
Metrics are recomputed from the saved predictions: not yet verified
Sample annotations are recorded: not yet verified
Dependence between samples is assessed: not yet verified

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

No verified artifact manifest is linked to this exact record.
File checksums match the recorded files: not yet verified
Predictions are matched to the right samples: not yet verified
Score meaning and direction are confirmed: not yet verified
A pinned run recipe exists: not yet verified
Compute requirements are estimated: not yet verified

Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

No verified artifact manifest is linked to this exact record.
File checksums match the recorded files: not yet verified
Predictions are matched to the right samples: not yet verified
Score meaning and direction are confirmed: not yet verified
Independent validation data exist: not yet verified
Overlap with training data is checked: not yet verified

Verified: Not verified

Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.

Artifacts and reproduction

No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Dataset and evaluation context

A dataset supplies biological observations. The evaluation protocol defines how those observations are split, used and scored.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

4 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-22-1b7cf027e4f6
Property and statement	Original source and location	Review and provenance
Source location Appendix task descriptions Context-only references	GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models Original source ↗ Appendix task descriptions Version: bioRxiv preprint version 2, posted 2026-08-11 Retrieved: 2026-10-11T00:44:58Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.source_locator` Source artifact SHA-256: `df9934c88ee245b1e19e155174169d6b6da57ae07c1a04bbea7115423facdf72` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Split Test split as defined in GFMBench-API Context-only references	GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models Original source ↗ Appendix task descriptions Version: bioRxiv preprint version 2, posted 2026-08-11 Retrieved: 2026-10-11T00:44:58Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.split` Source artifact SHA-256: `df9934c88ee245b1e19e155174169d6b6da57ae07c1a04bbea7115423facdf72` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Description LRB Variant Effect OMIM evaluation data as packaged in GFMBench-API. Context-only references	GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models Original source ↗ Appendix task descriptions Version: bioRxiv preprint version 2, posted 2026-08-11 Retrieved: 2026-10-11T00:44:58Z	not individually reviewed No individual claim review recorded Audit details Field: `description` Source artifact SHA-256: `df9934c88ee245b1e19e155174169d6b6da57ae07c1a04bbea7115423facdf72` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Name LRB Variant Effect OMIM test set (GFMBench-API) Context-only references	GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models Original source ↗ Appendix task descriptions Version: bioRxiv preprint version 2, posted 2026-08-11 Retrieved: 2026-10-11T00:44:58Z	not individually reviewed No individual claim review recorded Audit details Field: `name` Source artifact SHA-256: `df9934c88ee245b1e19e155174169d6b6da57ae07c1a04bbea7115423facdf72` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact

How to read the evidence

Sources and history

Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

1 source record and release history

GFMBench-API: A Standardized Interface for Benchmarking Genomic Foundation Models · Original source · bioRxiv preprint version 2, posted 2026-08-11

Download this release (gzip)

Technical metadata and extraction receipts

Stable ID: lit-genomics-20261011-gfmbench-data-lrb-variant-effect-omim

areas: dna-genomes
contexts: research
split: Test split as defined in GFMBench-API
source locator: Appendix task descriptions
missing metadata: version: reason: unreported

Related records

Suggest a correction