GenBench dataset Long-range splice site prediction (Mean): multi-class classification, sequence length 15K.
6 evaluations · 6 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Caduceus (GenBench) | Protocol: GenBench Long-range splice site prediction (Mean) Dataset: GenBench Long-range splice site prediction (Mean) | 0.691 AUROC (mean of donor and acceptor as printed) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceCaduceus on GenBench Long-range splice site prediction (Mean) lit-genomics-20261011-genbench-protocol-long-splice-mean Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 5, row 'Long-range splice site prediction (Mean)', column 'Caduceus' |
| Configuration: DNABERT2 (GenBench) | Protocol: GenBench Long-range splice site prediction (Mean) Dataset: GenBench Long-range splice site prediction (Mean) | 0.671 AUROC (mean of donor and acceptor as printed) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceDNABERT2 on GenBench Long-range splice site prediction (Mean) lit-genomics-20261011-genbench-protocol-long-splice-mean Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 5, row 'Long-range splice site prediction (Mean)', column 'DNABERT2' |
| Configuration: GENA-LM (GenBench) | Protocol: GenBench Long-range splice site prediction (Mean) Dataset: GenBench Long-range splice site prediction (Mean) | 0.679 AUROC (mean of donor and acceptor as printed) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceGENA-LM on GenBench Long-range splice site prediction (Mean) lit-genomics-20261011-genbench-protocol-long-splice-mean Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 5, row 'Long-range splice site prediction (Mean)', column 'GENA-LM' |
| Configuration: HyenaDNA (GenBench) | Protocol: GenBench Long-range splice site prediction (Mean) Dataset: GenBench Long-range splice site prediction (Mean) | 0.648 AUROC (mean of donor and acceptor as printed) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceHyenaDNA on GenBench Long-range splice site prediction (Mean) lit-genomics-20261011-genbench-protocol-long-splice-mean Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 5, row 'Long-range splice site prediction (Mean)', column 'HyenaDNA' |
| Configuration: NT (GenBench) | Protocol: GenBench Long-range splice site prediction (Mean) Dataset: GenBench Long-range splice site prediction (Mean) | 0.639 AUROC (mean of donor and acceptor as printed) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceNucleotide Transformer on GenBench Long-range splice site prediction (Mean) lit-genomics-20261011-genbench-protocol-long-splice-mean Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 5, row 'Long-range splice site prediction (Mean)', column 'Nucleotide Transformer' |
| Configuration: SpliceAI (GenBench) | Protocol: GenBench Long-range splice site prediction (Mean) Dataset: GenBench Long-range splice site prediction (Mean) | 0.632 AUROC (mean of donor and acceptor as printed) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceSpliceAI on GenBench Long-range splice site prediction (Mean) lit-genomics-20261011-genbench-protocol-long-splice-mean Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 5, row 'Long-range splice site prediction (Mean)', column 'SpliceAI' |
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5 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Population Table 2 row 'Splice Site Prediction': Multi-class classification; training size 146K, testing size 16K, length 15K (as printed; task-level sizes) Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Splice Site Prediction' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Source location Table 2, row 'Splice Site Prediction' Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Splice Site Prediction' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Split GenBench train and test split (Table 2) Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Splice Site Prediction' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Description GenBench dataset Long-range splice site prediction (Mean): multi-class classification, sequence length 15K. Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Splice Site Prediction' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Name GenBench Long-range splice site prediction (Mean) Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Splice Site Prediction' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Release 2026-10-22-1b7cf027e4f6 · Record review: source checked
Stable ID: lit-genomics-20261011-genbench-data-long-splice-mean