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ClusPro BM5 Table1 enzyme-balanced

Balanced energy coefficients for enzyme-containing complexes.

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Evaluations and results

2 evaluations · 22 results. Different protocols are not a single leaderboard.

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Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	51 CAPRI acceptable targets (all targets) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; Good models Number
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	3 CAPRI acceptable targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; difficult column; acceptable_or_better_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	0 CAPRI high-quality targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; difficult column; high_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	1 CAPRI medium targets (difficult (flexible) targets; top 10 models; medium (**) as printed, overlap with high not stated) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; difficult column; medium_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	44 CAPRI acceptable targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; easy column; acceptable_or_better_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	2 CAPRI high-quality targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; easy column; high_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	18 CAPRI medium targets (easy (rigid-body) targets; top 10 models; medium (**) as printed, overlap with high not stated) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; easy column; medium_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	4 CAPRI acceptable targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; intermediate column; acceptable_or_better_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	0 CAPRI high-quality targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; intermediate column; high_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	2 CAPRI medium targets (intermediate targets; top 10 models; medium (**) as printed, overlap with high not stated) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; intermediate column; medium_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top10 Dataset subset: BM5 Enzyme Table1 cohort	58% CAPRI top-10 success rate percent · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top10 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, first (top10) row; Good models %
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	59 CAPRI acceptable targets (all targets) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; Good models Number
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	4 CAPRI acceptable targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; difficult column; acceptable_or_better_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	0 CAPRI high-quality targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; difficult column; high_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	2 CAPRI medium targets (difficult (flexible) targets; top 30 models; medium (**) as printed, overlap with high not stated) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; difficult column; medium_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	50 CAPRI acceptable targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; easy column; acceptable_or_better_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	2 CAPRI high-quality targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; easy column; high_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	21 CAPRI medium targets (easy (rigid-body) targets; top 30 models; medium (**) as printed, overlap with high not stated) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; easy column; medium_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	5 CAPRI acceptable targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; intermediate column; acceptable_or_better_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	0 CAPRI high-quality targets (by difficulty category) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; intermediate column; high_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	2 CAPRI medium targets (intermediate targets; top 30 models; medium (**) as printed, overlap with high not stated) count · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; intermediate column; medium_accuracy_targets
Configuration: ClusPro BM5 Table1 enzyme-balanced	Protocol: ClusPro BM5 Enzyme top30 Dataset subset: BM5 Enzyme Table1 cohort	67% CAPRI top-30 success rate percent · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source ClusPro Enzyme top30 Not reported Aggregation: Not reported Performance and its limits in rigid body protein-protein docking · Table1 Enzyme, second (top30) row; Good models %

Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.

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Related profile: ClusPro rigid-body docking. This page retains the exact record and its evaluation context.

Evidence

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Evidence table

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2 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statement	Original source and location	Review and provenance
Facets: method types 1 values conventional_pipeline Individual claims	Performance and its limits in rigid body protein-protein docking Original source ↗ ClusPro BM5: FFT rigid-body docking Version: Structure 28(9):1071–1081.e3; 2020; PMC author manuscript NIHMS1608597 Retrieved: 2026-09-30T21:50:23.483497+00:00	conflicting claim ["source-hash-verification","automated-source-review"] · 2026-10-12 Audit details Correct the method type from none to conventional_pipeline (use-case baseline review 2026-10-12, table 2). Evidence from docs/reviews/use-cases/baselines-2026-10-12.md. Independent review 2026-10-12: approved. See docs/reviews/2026-10-12-method-type-corrections.md. Conflicting source claim: `"[\"conventional_pipeline\"]"`. Claim record status: source_checked. Field: `facets.method_types` Claim: metadata-correction-tags-20261012-f8db8768f0b5c424e921 Source artifact SHA-256: `1c02bd7c53eb0e5d5c243b5e6da23168eb20bcc32ab970719666a5838fd58443` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `575577ca8bf96f3cb9c9042f883c9b888d3bdeb90567c0f8fb9128f1203d6a86` Extraction artifact
Relationship: configuration of ucc-docking-cluspro-bm5-2020-method Individual claims	Performance and its limits in rigid body protein-protein docking Original source ↗ Results and STAR Methods ClusPro Docking Server Version: Structure 28(9):1071–1081.e3; 2020; PMC author manuscript NIHMS1608597 Retrieved: 2026-09-30T21:50:23.483497+00:00	source checked ["automated-source-review"] · 2026-09-30T21:50:23.483497+00:00 Audit details Source transcription only; not execution, human scientific review or independent reproduction. Field: `links:configuration_of:ucc-docking-cluspro-bm5-2020-method` Claim: ucc-docking-cluspro-bm5-2020-claim-config-enzyme-balanced Source artifact SHA-256: `1c02bd7c53eb0e5d5c243b5e6da23168eb20bcc32ab970719666a5838fd58443` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact

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Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

1 source record and release history

Performance and its limits in rigid body protein-protein docking · Original source · Structure 28(9):1071–1081.e3; 2020; PMC author manuscript NIHMS1608597

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Technical metadata and extraction receipts

Stable ID: ucc-docking-cluspro-bm5-2020-config-enzyme-balanced

areas: proteins-complexes
method types: conventional_pipeline
version: 2020 author configuration
source locator: Results paragraph preceding Table1; STAR Methods ClusPro Docking Server
review: method: automated-source-review; reviewed at: 2026-09-30T21:50:23.483497+00:00; reviewer: codex; note: Source transcription only; not execution, human scientific review or independent reproduction.; reviewer note: role: primary-source table extraction
missing metadata: exact input structure hashes: reason: unextracted; software commit: reason: unextracted

Related records

configuration of: ClusPro rigid-body docking
subject: ClusPro BM5 Table1 enzyme-balanced: facets.method_types
implemented by: ClusPro conventional docking baseline: Enzyme
subject: ClusPro enzyme-balanced identity
system: ClusPro Enzyme top10
system: ClusPro Enzyme top30

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