NSSAC (assembly) (CAMI II pathogen challenge submission)
NSSAC (assembly) as submitted to the CAMI II clinical pathogen challenge.
Overview
NSSAC (assembly) as submitted to the CAMI II clinical pathogen challenge.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
1 evaluation · 2 results. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: NSSAC (assembly) (CAMI II pathogen challenge submission) | Protocol: Identify all pathogens and the causal pathogen in one clinical blood metagenome (CAMI II clinical pathogen challenge) Dataset: CAMI II clinical pathogen challenge: blood metagenome from a patient with haemorrhagic fever | no success-rate unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Evaluation origin not reported · Source checkedMethods, coverage and sourceNSSAC (assembly): CAMI II clinical pathogen challenge rna-pathogen-20261009-protocol-meyer2022-causal-pathogen Aggregation: Not reported Meyer et al. 2022, Supplementary Tables 1-40 · Supplementary Table 39 cell B10, row 'NSSAC (assembly)', column 'Causal pathogen in submitted list of taxa' |
| Configuration: NSSAC (assembly) (CAMI II pathogen challenge submission) | Protocol: Identify all pathogens and the causal pathogen in one clinical blood metagenome (CAMI II clinical pathogen challenge) Dataset: CAMI II clinical pathogen challenge: blood metagenome from a patient with haemorrhagic fever | no success-rate unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Evaluation origin not reported · Source checkedMethods, coverage and sourceNSSAC (assembly): CAMI II clinical pathogen challenge rna-pathogen-20261009-protocol-meyer2022-causal-pathogen Aggregation: Not reported Meyer et al. 2022, Supplementary Tables 1-40 · Supplementary Table 39 cell C10, row 'NSSAC (assembly)', column 'Predicted causal pathogen' |
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Evidence
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Evidence table
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Sources and history
Release 2026-10-09-8cc1db47c7f9 · Record review: source checked
1 source records and release history
- Meyer et al. 2022, Supplementary Tables 1-40 · Original source · 41592_2022_1431_MOESM3_ESM.xlsx (Supplementary Tables), as linked from the article XML <supplementary-material id="MOESM3">
Technical metadata and extraction receipts
Stable ID: rna-pathogen-20261009-config-meyer2022-nssac-assembly
- areas
- microbes-communities
- contexts
- clinical_research
- method types
- conventional_pipeline
- reported name
- NSSAC (assembly)
- source locator
- Supplementary Table 39 cell A10
- foundation model eligible
- false
- missing metadata
- version: reason: unreported; note: No version printed in Supplementary Table 39
Related records
- configuration of: NSSAC
- system: NSSAC (assembly): CAMI II clinical pathogen challenge