MetaPhyler v1.25 (CAMI II pathogen challenge submission)
MetaPhyler v1.25 as submitted to the CAMI II clinical pathogen challenge.
Overview
MetaPhyler v1.25 as submitted to the CAMI II clinical pathogen challenge.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
1 evaluation · 2 results. Different protocols are not a single leaderboard.
Filter evaluations
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: MetaPhyler v1.25 (CAMI II pathogen challenge submission) | Protocol: Identify all pathogens and the causal pathogen in one clinical blood metagenome (CAMI II clinical pathogen challenge) Dataset: CAMI II clinical pathogen challenge: blood metagenome from a patient with haemorrhagic fever | no success-rate unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Evaluation origin not reported · Source checkedMethods, coverage and sourceMetaPhyler v1.25: CAMI II clinical pathogen challenge rna-pathogen-20261009-protocol-meyer2022-causal-pathogen Aggregation: Not reported Meyer et al. 2022, Supplementary Tables 1-40 · Supplementary Table 39 cell B8, row 'MetaPhyler v1.25', column 'Causal pathogen in submitted list of taxa' |
| Configuration: MetaPhyler v1.25 (CAMI II pathogen challenge submission) | Protocol: Identify all pathogens and the causal pathogen in one clinical blood metagenome (CAMI II clinical pathogen challenge) Dataset: CAMI II clinical pathogen challenge: blood metagenome from a patient with haemorrhagic fever | no success-rate unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Evaluation origin not reported · Source checkedMethods, coverage and sourceMetaPhyler v1.25: CAMI II clinical pathogen challenge rna-pathogen-20261009-protocol-meyer2022-causal-pathogen Aggregation: Not reported Meyer et al. 2022, Supplementary Tables 1-40 · Supplementary Table 39 cell C8, row 'MetaPhyler v1.25', column 'Predicted causal pathogen' |
Source checking is not independent reproduction. Release 2026-10-09-8cc1db47c7f9.
Use this model
How it works, versions and access
Strengths, limitations and unresolved questions
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
0 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|
No evidence rows match these filters. Choose another scope or clear the search.
Sources and history
Release 2026-10-09-8cc1db47c7f9 · Record review: source checked
1 source records and release history
- Meyer et al. 2022, Supplementary Tables 1-40 · Original source · 41592_2022_1431_MOESM3_ESM.xlsx (Supplementary Tables), as linked from the article XML <supplementary-material id="MOESM3">
Technical metadata and extraction receipts
Stable ID: rna-pathogen-20261009-config-meyer2022-metaphyler-v1-25
- areas
- microbes-communities
- contexts
- clinical_research
- method types
- conventional_pipeline
- reported name
- MetaPhyler v1.25
- source locator
- Supplementary Table 39 cell A8
- foundation model eligible
- false
- version
- 1.25
Related records
- configuration of: MetaPhyler
- system: MetaPhyler v1.25: CAMI II clinical pathogen challenge