MetaPhlAn v2.9.14 (CAMI II pathogen challenge submission)
MetaPhlAn v2.9.14 as submitted to the CAMI II clinical pathogen challenge.
Overview
MetaPhlAn v2.9.14 as submitted to the CAMI II clinical pathogen challenge.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
1 evaluation · 2 results. Different protocols are not a single leaderboard.
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Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: MetaPhlAn v2.9.14 (CAMI II pathogen challenge submission) | Protocol: Identify all pathogens and the causal pathogen in one clinical blood metagenome (CAMI II clinical pathogen challenge) Dataset: CAMI II clinical pathogen challenge: blood metagenome from a patient with haemorrhagic fever | no success-rate unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Evaluation origin not reported · Source checkedMethods, coverage and sourceMetaPhlAn v2.9.14: CAMI II clinical pathogen challenge rna-pathogen-20261009-protocol-meyer2022-causal-pathogen Aggregation: Not reported Meyer et al. 2022, Supplementary Tables 1-40 · Supplementary Table 39 cell B7, row 'MetaPhlAn v2.9.14', column 'Causal pathogen in submitted list of taxa' |
| Configuration: MetaPhlAn v2.9.14 (CAMI II pathogen challenge submission) | Protocol: Identify all pathogens and the causal pathogen in one clinical blood metagenome (CAMI II clinical pathogen challenge) Dataset: CAMI II clinical pathogen challenge: blood metagenome from a patient with haemorrhagic fever | no success-rate unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Evaluation origin not reported · Source checkedMethods, coverage and sourceMetaPhlAn v2.9.14: CAMI II clinical pathogen challenge rna-pathogen-20261009-protocol-meyer2022-causal-pathogen Aggregation: Not reported Meyer et al. 2022, Supplementary Tables 1-40 · Supplementary Table 39 cell C7, row 'MetaPhlAn v2.9.14', column 'Predicted causal pathogen' |
Source checking is not independent reproduction. Release 2026-10-09-8cc1db47c7f9.
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Evidence
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Evidence table
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Sources and history
Release 2026-10-09-8cc1db47c7f9 · Record review: source checked
1 source records and release history
- Meyer et al. 2022, Supplementary Tables 1-40 · Original source · 41592_2022_1431_MOESM3_ESM.xlsx (Supplementary Tables), as linked from the article XML <supplementary-material id="MOESM3">
Technical metadata and extraction receipts
Stable ID: rna-pathogen-20261009-config-meyer2022-metaphlan-v2-9-14
- areas
- microbes-communities
- contexts
- clinical_research
- method types
- conventional_pipeline
- reported name
- MetaPhlAn v2.9.14
- source locator
- Supplementary Table 39 cell A7
- foundation model eligible
- false
- version
- 2.9.14
Related records
- configuration of: MetaPhlAn
- system: MetaPhlAn v2.9.14: CAMI II clinical pathogen challenge