rewirebio.iobenchmarks
Configuration

RITA XL

RITA XL: Fitness prediction model.

1 evaluation · 5 results

Overview

An explanatory profile has not yet been reviewed for this record.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluations and results

1 evaluation · 5 results. Different protocols are not a single leaderboard.

Dataset subset: ProteinGym substitution DMS assays (ProteinGym split)

Sorted by AUROC (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.

Tested configurationProtocol and datasetAUROCMCCNDCG at 10%SpearmanTop 10% recall
RITA XLEvaluationProteinGym ZS-SUB-AUC: Zero-shot substitutions, AUC0.707Not reportedNot reportedNot reportedNot reported
RITA XLEvaluationProteinGym ZS-SUB-MCC: Zero-shot substitutions, MCCNot reported0.293Not reportedNot reportedNot reported
RITA XLEvaluationProteinGym ZS-SUB-NDCG: Zero-shot substitutions, NDCG@10%Not reportedNot reported0.751Not reportedNot reported
RITA XLEvaluationProteinGym ZS-SUB-RECALL: Zero-shot substitutions, top 10% recallNot reportedNot reportedNot reportedNot reported0.193
RITA XLEvaluationProteinGym ZS-SUB-SPEARMAN: Zero-shot substitutions, SpearmanNot reportedNot reportedNot reported0.372Not reported
All 5 result rows with coverage, uncertainty and sources
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Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: RITA XLTask: ProteinGym ZS-SUB-AUC: Zero-shot substitutions, AUC
Dataset subset: ProteinGym substitution DMS assays (ProteinGym split)
0.707 AUROC
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

RITA XL on ProteinGym ZS-SUB-AUC: Zero-shot substitutions, AUC

Zero-shot scoring of substitution assays, averaged over assays with the correction the paper describes.

Aggregation: Not reported

ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design · Table 2, row(RITA XL), column(Zero-shot substitutions, AUC)
Configuration: RITA XLTask: ProteinGym ZS-SUB-MCC: Zero-shot substitutions, MCC
Dataset subset: ProteinGym substitution DMS assays (ProteinGym split)
0.293 MCC
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

RITA XL on ProteinGym ZS-SUB-MCC: Zero-shot substitutions, MCC

Zero-shot scoring of substitution assays, averaged over assays with the correction the paper describes.

Aggregation: Not reported

ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design · Table 2, row(RITA XL), column(Zero-shot substitutions, MCC)
Configuration: RITA XLTask: ProteinGym ZS-SUB-NDCG: Zero-shot substitutions, NDCG@10%
Dataset subset: ProteinGym substitution DMS assays (ProteinGym split)
0.751 NDCG at 10%
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

RITA XL on ProteinGym ZS-SUB-NDCG: Zero-shot substitutions, NDCG@10%

Zero-shot scoring of substitution assays, averaged over assays with the correction the paper describes.

Aggregation: Not reported

ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design · Table 2, row(RITA XL), column(Zero-shot substitutions, NDCG@10%)
Configuration: RITA XLTask: ProteinGym ZS-SUB-RECALL: Zero-shot substitutions, top 10% recall
Dataset subset: ProteinGym substitution DMS assays (ProteinGym split)
0.193 Top 10% recall
fraction · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

RITA XL on ProteinGym ZS-SUB-RECALL: Zero-shot substitutions, top 10% recall

Zero-shot scoring of substitution assays, averaged over assays with the correction the paper describes.

Aggregation: Not reported

ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design · Table 2, row(RITA XL), column(Zero-shot substitutions, top 10% recall)
Configuration: RITA XLTask: ProteinGym ZS-SUB-SPEARMAN: Zero-shot substitutions, Spearman
Dataset subset: ProteinGym substitution DMS assays (ProteinGym split)
0.372 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

RITA XL on ProteinGym ZS-SUB-SPEARMAN: Zero-shot substitutions, Spearman

Zero-shot scoring of substitution assays, averaged over assays with the correction the paper describes.

Aggregation: Not reported

ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design · Table 2, row(RITA XL), column(Zero-shot substitutions, Spearman)

Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.

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Evidence

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Evidence table

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Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
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Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: proteingym-method-rita-xl

areas
proteins-complexes
source locator
Table 2, row(RITA XL)
missing metadata
checkpoint revision: reason: unreported; parameters: reason: unextracted
provenance note
Fitness prediction model evaluated by the ProteinGym authors under their harness.
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