Configuration

Native PDBs

Native PDBs, scored on ProteinBench; its model version and settings are not identified.

Overview

An explanatory profile has not yet been reviewed for this record.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluations and results

28 evaluations · 28 results. Different protocols are not a single leaderboard.

Sorted by Proteinbench max clust (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.

Tested configuration	Protocol and dataset	Proteinbench max clust	Scrmsd	Sctm	Proteinbench pairwise TM
Native PDBsEvaluation	ProteinBench BB-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust., Designed backbones at fixed lengths (ProteinBench split)	0.8 (best in column)	Not reported	Not reported	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust., Co-generated structures and sequences at fixed lengths (ProteinBench split)	0.8 (best in column)	Not reported	Not reported	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust., Designed backbones at fixed lengths (ProteinBench split)	0.77	Not reported	Not reported	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust., Designed backbones at fixed lengths (ProteinBench split)	0.77	Not reported	Not reported	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-200-DIVERSITY-MAX-CLUST: length 200, Diversity Max Clust., Co-generated structures and sequences at fixed lengths (ProteinBench split)	0.77	Not reported	Not reported	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust., Co-generated structures and sequences at fixed lengths (ProteinBench split)	0.75	Not reported	Not reported	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust., Co-generated structures and sequences at fixed lengths (ProteinBench split)	0.75	Not reported	Not reported	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-50-DIVERSITY-MAX-CLUST: length 50, Diversity Max Clust., Designed backbones at fixed lengths (ProteinBench split)	0.66	Not reported	Not reported	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-100-DIVERSITY-PAIRWISE-TM: length 100, Diversity pairwise TM, Designed backbones at fixed lengths (ProteinBench split)	Not reported	Not reported	Not reported	0.30 ± 0.02
Native PDBsEvaluation	ProteinBench BB-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD, Designed backbones at fixed lengths (ProteinBench split)	Not reported	0.67 ± 1.61 (best in column)	Not reported	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM, Designed backbones at fixed lengths (ProteinBench split)	Not reported	Not reported	0.96 ± 0.10	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-300-DIVERSITY-PAIRWISE-TM: length 300, Diversity pairwise TM, Designed backbones at fixed lengths (ProteinBench split)	Not reported	Not reported	Not reported	0.28 ± 0.02 (best in column)
Native PDBsEvaluation	ProteinBench BB-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD, Designed backbones at fixed lengths (ProteinBench split)	Not reported	0.82 ± 2.67	Not reported	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM, Designed backbones at fixed lengths (ProteinBench split)	Not reported	Not reported	0.97 ± 0.10 (best in column)	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-50-DIVERSITY-PAIRWISE-TM: length 50, Diversity pairwise TM, Designed backbones at fixed lengths (ProteinBench split)	Not reported	Not reported	Not reported	0.29 ± 0.03
Native PDBsEvaluation	ProteinBench BB-LENGTH-50-QUALITY-SCRMSD: length 50, Quality scRMSD, Designed backbones at fixed lengths (ProteinBench split)	Not reported	0.74 ± 1.45	Not reported	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-50-QUALITY-SCTM: length 50, Quality scTM, Designed backbones at fixed lengths (ProteinBench split)	Not reported	Not reported	0.91 ± 0.11	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-500-DIVERSITY-PAIRWISE-TM: length 500, Diversity pairwise TM, Designed backbones at fixed lengths (ProteinBench split)	Not reported	Not reported	Not reported	0.29 ± 0.03
Native PDBsEvaluation	ProteinBench BB-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSD, Designed backbones at fixed lengths (ProteinBench split)	Not reported	1.07 ± 5.96	Not reported	Not reported
Native PDBsEvaluation	ProteinBench BB-LENGTH-500-QUALITY-SCTM: length 500, Quality scTM, Designed backbones at fixed lengths (ProteinBench split)	Not reported	Not reported	0.97 ± 0.17 (best in column)	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD, Co-generated structures and sequences at fixed lengths (ProteinBench split)	Not reported	2.98 ± 3.49	Not reported	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM, Co-generated structures and sequences at fixed lengths (ProteinBench split)	Not reported	Not reported	0.91 ± 0.11	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-200-QUALITY-SCRMSD: length 200, Quality scRMSD, Co-generated structures and sequences at fixed lengths (ProteinBench split)	Not reported	3.24 ± 3.77	Not reported	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-200-QUALITY-SCTM: length 200, Quality scTM, Co-generated structures and sequences at fixed lengths (ProteinBench split)	Not reported	Not reported	0.88 ± 0.09	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD, Co-generated structures and sequences at fixed lengths (ProteinBench split)	Not reported	3.94 ± 4.95	Not reported	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM, Co-generated structures and sequences at fixed lengths (ProteinBench split)	Not reported	Not reported	0.92 ± 0.12	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSD, Co-generated structures and sequences at fixed lengths (ProteinBench split)	Not reported	9.64 ± 7.05	Not reported	Not reported
Native PDBsEvaluation	ProteinBench CO-LENGTH-500-QUALITY-SCTM: length 500, Quality scTM, Co-generated structures and sequences at fixed lengths (ProteinBench split)	Not reported	Not reported	0.90 ± 0.14	Not reported

All 28 result rows with coverage, uncertainty and sources

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Tested model or methodProtocolDatasetEvaluation setupMetricEvidence origin

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Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust. Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.77 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust. Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 100, Diversity Max Clust.↑)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-100-DIVERSITY-PAIRWISE-TM: length 100, Diversity pairwise TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.30 ± 0.02 Proteinbench pairwise TM unitless · lower Uncertainty: SD 0.02 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-100-DIVERSITY-PAIRWISE-TM: length 100, Diversity pairwise TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 100, Diversity pairwise TM ↓)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.67 ± 1.61 Scrmsd unit-unreported · lower Uncertainty: SD 1.61 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 100, Quality scRMSD ↓)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.96 ± 0.10 Sctm unitless · higher Uncertainty: SD 0.10 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 100, Quality scTM ↑)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust. Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.77 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust. Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 300, Diversity Max Clust. ↑)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-300-DIVERSITY-PAIRWISE-TM: length 300, Diversity pairwise TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.28 ± 0.02 Proteinbench pairwise TM unitless · lower Uncertainty: SD 0.02 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-300-DIVERSITY-PAIRWISE-TM: length 300, Diversity pairwise TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 300, Diversity pairwise TM ↓)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.82 ± 2.67 Scrmsd unit-unreported · lower Uncertainty: SD 2.67 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 300, Quality scRMSD ↓)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.97 ± 0.10 Sctm unitless · higher Uncertainty: SD 0.10 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 300, Quality scTM ↑)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-50-DIVERSITY-MAX-CLUST: length 50, Diversity Max Clust. Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.66 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-50-DIVERSITY-MAX-CLUST: length 50, Diversity Max Clust. Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 50, Diversity Max Clust. ↑)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-50-DIVERSITY-PAIRWISE-TM: length 50, Diversity pairwise TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.29 ± 0.03 Proteinbench pairwise TM unitless · lower Uncertainty: SD 0.03 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-50-DIVERSITY-PAIRWISE-TM: length 50, Diversity pairwise TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 50, Diversity pairwise TM ↓)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-50-QUALITY-SCRMSD: length 50, Quality scRMSD Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.74 ± 1.45 Scrmsd unit-unreported · lower Uncertainty: SD 1.45 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-50-QUALITY-SCRMSD: length 50, Quality scRMSD Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 50, Quality scRMSD ↓)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-50-QUALITY-SCTM: length 50, Quality scTM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.91 ± 0.11 Sctm unitless · higher Uncertainty: SD 0.11 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-50-QUALITY-SCTM: length 50, Quality scTM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 50, Quality scTM ↑)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust. Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.8 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust. Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 500, Diversity Max Clust.↑)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-500-DIVERSITY-PAIRWISE-TM: length 500, Diversity pairwise TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.29 ± 0.03 Proteinbench pairwise TM unitless · lower Uncertainty: SD 0.03 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-500-DIVERSITY-PAIRWISE-TM: length 500, Diversity pairwise TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 500, Diversity pairwise TM ↓)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSD Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	1.07 ± 5.96 Scrmsd unit-unreported · lower Uncertainty: SD 5.96 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSD Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 500, Quality scRMSD ↓)
Configuration: Native PDBs	Task: ProteinBench BB-LENGTH-500-QUALITY-SCTM: length 500, Quality scTM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.97 ± 0.17 Sctm unitless · higher Uncertainty: SD 0.17 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench BB-LENGTH-500-QUALITY-SCTM: length 500, Quality scTM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 500, Quality scTM ↑)
Configuration: Native PDBs	Task: ProteinBench CO-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust. Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split)	0.75 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench CO-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust. Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 100, Diversity Max Clust. ↑)
Configuration: Native PDBs	Task: ProteinBench CO-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split)	2.98 ± 3.49 Scrmsd unit-unreported · lower Uncertainty: SD 3.49 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench CO-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 100, Quality scRMSD ↓)
Configuration: Native PDBs	Task: ProteinBench CO-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split)	0.91 ± 0.11 Sctm unitless · higher Uncertainty: SD 0.11 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench CO-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 100, Quality scTM ↑)
Configuration: Native PDBs	Task: ProteinBench CO-LENGTH-200-DIVERSITY-MAX-CLUST: length 200, Diversity Max Clust. Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split)	0.77 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench CO-LENGTH-200-DIVERSITY-MAX-CLUST: length 200, Diversity Max Clust. Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 200, Diversity Max Clust. ↑)
Configuration: Native PDBs	Task: ProteinBench CO-LENGTH-200-QUALITY-SCRMSD: length 200, Quality scRMSD Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split)	3.24 ± 3.77 Scrmsd unit-unreported · lower Uncertainty: SD 3.77 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench CO-LENGTH-200-QUALITY-SCRMSD: length 200, Quality scRMSD Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 200, Quality scRMSD ↓)
Configuration: Native PDBs	Task: ProteinBench CO-LENGTH-200-QUALITY-SCTM: length 200, Quality scTM Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split)	0.88 ± 0.09 Sctm unitless · higher Uncertainty: SD 0.09 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench CO-LENGTH-200-QUALITY-SCTM: length 200, Quality scTM Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 200, Quality scTM ↑)
Configuration: Native PDBs	Task: ProteinBench CO-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust. Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split)	0.75 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench CO-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust. Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 300, Diversity Max Clust. ↑)
Configuration: Native PDBs	Task: ProteinBench CO-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split)	3.94 ± 4.95 Scrmsd unit-unreported · lower Uncertainty: SD 4.95 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench CO-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 300, Quality scRMSD ↓)
Configuration: Native PDBs	Task: ProteinBench CO-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split)	0.92 ± 0.12 Sctm unitless · higher Uncertainty: SD 0.12 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Native PDBs on ProteinBench CO-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 300, Quality scTM ↑)

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Stable ID: proteinbench-method-native-pdbs

areas: proteins-complexes
source locator: Table 3, row(Native PDBs)
missing metadata: checkpoint revision: reason: unreported; parameters: reason: unextracted
provenance note: Protein model evaluated by the ProteinBench authors under their harness.

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