Configuration

Chroma

Chroma, scored on ProteinBench; its model version and settings are not identified.

Overview

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Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluations and results

20 evaluations · 20 results. Different protocols are not a single leaderboard.

Dataset subset: Designed backbones at fixed lengths (ProteinBench split)

Sorted by Proteinbench max clust (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.

Tested configuration	Protocol and dataset	Proteinbench max clust	Proteinbench max TM	Proteinbench pairwise TM	Scrmsd	Sctm
ChromaEvaluation	ProteinBench BB-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust.	0.99 (best in column)	Not reported	Not reported	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust.	0.67	Not reported	Not reported	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust.	0.59	Not reported	Not reported	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-50-DIVERSITY-MAX-CLUST: length 50, Diversity Max Clust.	0.48	Not reported	Not reported	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-100-DIVERSITY-PAIRWISE-TM: length 100, Diversity pairwise TM	Not reported	Not reported	0.35 ± 0.03	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-100-NOVELTY-MAX-TM: length 100, Novelty Max TM	Not reported	0.70 ± 0.01	Not reported	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD	Not reported	Not reported	Not reported	1.27 ± 1.85	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM	Not reported	Not reported	Not reported	Not reported	0.89 ± 0.13 (best in column)
ChromaEvaluation	ProteinBench BB-LENGTH-300-DIVERSITY-PAIRWISE-TM: length 300, Diversity pairwise TM	Not reported	Not reported	0.36 ± 0.04	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-300-NOVELTY-MAX-TM: length 300, Novelty Max TM	Not reported	0.66 ± 0.01	Not reported	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD	Not reported	Not reported	Not reported	2.47 ± 3.63	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM	Not reported	Not reported	Not reported	Not reported	0.87 ± 0.13
ChromaEvaluation	ProteinBench BB-LENGTH-50-DIVERSITY-PAIRWISE-TM: length 50, Diversity pairwise TM	Not reported	Not reported	0.29 ± 0.01 (best in column)	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-50-NOVELTY-MAX-TM: length 50, Novelty Max TM	Not reported	0.59 ± 0.08 (best in column)	Not reported	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-50-QUALITY-SCRMSD: length 50, Quality scRMSD	Not reported	Not reported	Not reported	1.05 ± 1.49 (best in column)	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-50-QUALITY-SCTM: length 50, Quality scTM	Not reported	Not reported	Not reported	Not reported	0.85 ± 0.15
ChromaEvaluation	ProteinBench BB-LENGTH-500-DIVERSITY-PAIRWISE-TM: length 500, Diversity pairwise TM	Not reported	Not reported	0.29 ± 0.01 (best in column)	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-500-NOVELTY-MAX-TM: length 500, Novelty Max TM	Not reported	0.60 ± 0.01	Not reported	Not reported	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSD	Not reported	Not reported	Not reported	6.71 ± 5.76	Not reported
ChromaEvaluation	ProteinBench BB-LENGTH-500-QUALITY-SCTM: length 500, Quality scTM	Not reported	Not reported	Not reported	Not reported	0.72 ± 0.18

All 20 result rows with coverage, uncertainty and sources

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Tested model or methodProtocolDatasetEvaluation setupMetricEvidence origin

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Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: Chroma	Task: ProteinBench BB-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust. Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.59 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust. Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 100, Diversity Max Clust.↑)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-100-DIVERSITY-PAIRWISE-TM: length 100, Diversity pairwise TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.35 ± 0.03 Proteinbench pairwise TM unitless · lower Uncertainty: SD 0.03 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-100-DIVERSITY-PAIRWISE-TM: length 100, Diversity pairwise TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 100, Diversity pairwise TM ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-100-NOVELTY-MAX-TM: length 100, Novelty Max TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.70 ± 0.01 Proteinbench max TM unitless · lower Uncertainty: SD 0.01 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-100-NOVELTY-MAX-TM: length 100, Novelty Max TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 100, Novelty Max TM ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	1.27 ± 1.85 Scrmsd unit-unreported · lower Uncertainty: SD 1.85 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 100, Quality scRMSD ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.89 ± 0.13 Sctm unitless · higher Uncertainty: SD 0.13 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 100, Quality scTM ↑)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust. Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.67 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust. Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 300, Diversity Max Clust. ↑)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-300-DIVERSITY-PAIRWISE-TM: length 300, Diversity pairwise TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.36 ± 0.04 Proteinbench pairwise TM unitless · lower Uncertainty: SD 0.04 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-300-DIVERSITY-PAIRWISE-TM: length 300, Diversity pairwise TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 300, Diversity pairwise TM ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-300-NOVELTY-MAX-TM: length 300, Novelty Max TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.66 ± 0.01 Proteinbench max TM unitless · lower Uncertainty: SD 0.01 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-300-NOVELTY-MAX-TM: length 300, Novelty Max TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 300, Novelty Max TM ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	2.47 ± 3.63 Scrmsd unit-unreported · lower Uncertainty: SD 3.63 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 300, Quality scRMSD ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.87 ± 0.13 Sctm unitless · higher Uncertainty: SD 0.13 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 300, Quality scTM ↑)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-50-DIVERSITY-MAX-CLUST: length 50, Diversity Max Clust. Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.48 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-50-DIVERSITY-MAX-CLUST: length 50, Diversity Max Clust. Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 50, Diversity Max Clust. ↑)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-50-DIVERSITY-PAIRWISE-TM: length 50, Diversity pairwise TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.29 ± 0.01 Proteinbench pairwise TM unitless · lower Uncertainty: SD 0.01 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-50-DIVERSITY-PAIRWISE-TM: length 50, Diversity pairwise TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 50, Diversity pairwise TM ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-50-NOVELTY-MAX-TM: length 50, Novelty Max TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.59 ± 0.08 Proteinbench max TM unitless · lower Uncertainty: SD 0.08 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-50-NOVELTY-MAX-TM: length 50, Novelty Max TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 50, Novelty Max TM ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-50-QUALITY-SCRMSD: length 50, Quality scRMSD Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	1.05 ± 1.49 Scrmsd unit-unreported · lower Uncertainty: SD 1.49 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-50-QUALITY-SCRMSD: length 50, Quality scRMSD Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 50, Quality scRMSD ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-50-QUALITY-SCTM: length 50, Quality scTM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.85 ± 0.15 Sctm unitless · higher Uncertainty: SD 0.15 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-50-QUALITY-SCTM: length 50, Quality scTM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 50, Quality scTM ↑)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust. Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.99 Proteinbench max clust fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust. Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 500, Diversity Max Clust.↑)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-500-DIVERSITY-PAIRWISE-TM: length 500, Diversity pairwise TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.29 ± 0.01 Proteinbench pairwise TM unitless · lower Uncertainty: SD 0.01 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-500-DIVERSITY-PAIRWISE-TM: length 500, Diversity pairwise TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 500, Diversity pairwise TM ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-500-NOVELTY-MAX-TM: length 500, Novelty Max TM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.60 ± 0.01 Proteinbench max TM unitless · lower Uncertainty: SD 0.01 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-500-NOVELTY-MAX-TM: length 500, Novelty Max TM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 500, Novelty Max TM ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSD Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	6.71 ± 5.76 Scrmsd unit-unreported · lower Uncertainty: SD 5.76 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSD Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 500, Quality scRMSD ↓)
Configuration: Chroma	Task: ProteinBench BB-LENGTH-500-QUALITY-SCTM: length 500, Quality scTM Dataset subset: Designed backbones at fixed lengths (ProteinBench split)	0.72 ± 0.18 Sctm unitless · higher Uncertainty: SD 0.18 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Chroma on ProteinBench BB-LENGTH-500-QUALITY-SCTM: length 500, Quality scTM Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Aggregation: Not reported proteinbench primary benchmark evidence · Table 3, row(Chroma), column(length 500, Quality scTM ↑)

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proteinbench primary benchmark evidence · Original source · 2409.06744v1

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Technical metadata and extraction receipts

Stable ID: proteinbench-method-chroma

areas: proteins-complexes
source locator: Table 3, row(Chroma)
missing metadata: checkpoint revision: reason: unreported; parameters: reason: unextracted
provenance note: Protein model evaluated by the ProteinBench authors under their harness.

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