Configuration

Shallow CNN / TS

Shallow CNN / TS as evaluated in the cited study. Backbone: Shallow CNN; adaptation: TS.

Sources

GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Domain

9 evaluations · 9 results

Overview

Key specifications have not been extracted for this record. See the linked evaluation and sources for the reported setup.

limited source coverage · Automated source review, 2026-09-17. All specifications and missing details

Evaluations and results

9 evaluations · 9 results. Different protocols are not a single leaderboard.

Filter evaluations

Tested model or methodProtocolDatasetEvaluation setupMetricEvidence origin

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: Shallow CNN / TS	Protocol: SugarBase taxonomy · Kingdom (GlycanML taxonomy prediction) Dataset: SugarBase taxonomy · Kingdom	91.55(1.03)% accuracy percent · higher Uncertainty: type: standard_deviation; value: 1.03; n: 3; unit: same_as_metric Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Shallow CNN / TS: SugarBase taxonomy · Kingdom Fixed backbone; compare adaptation strategies, not standalone foundation models. SugarBase taxonomy: motif-frequency K-means cluster allocation 8:1:1. Aggregation: Not reported GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Kingdom
Configuration: Shallow CNN / TS	Protocol: SugarBase taxonomy · Mean Acc (GlycanML taxonomy prediction) Dataset: SugarBase taxonomy · Mean Acc	63.77(0.19)% mean accuracy across eight taxonomy tasks percent · higher Uncertainty: type: standard_deviation; value: 0.19; n: 3; unit: same_as_metric Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Shallow CNN / TS: SugarBase taxonomy · Mean Acc Fixed backbone; compare adaptation strategies, not standalone foundation models. SugarBase taxonomy: motif-frequency K-means cluster allocation 8:1:1. Aggregation: Not reported GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Mean Acc (%)
Configuration: Shallow CNN / TS	Protocol: SugarBase taxonomy · Class (GlycanML taxonomy prediction) Dataset: SugarBase taxonomy · Class	71.49(0.58)% accuracy percent · higher Uncertainty: type: standard_deviation; value: 0.58; n: 3; unit: same_as_metric Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Shallow CNN / TS: SugarBase taxonomy · Class Fixed backbone; compare adaptation strategies, not standalone foundation models. SugarBase taxonomy: motif-frequency K-means cluster allocation 8:1:1. Aggregation: Not reported GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Class
Configuration: Shallow CNN / TS	Protocol: SugarBase taxonomy · Family (GlycanML taxonomy prediction) Dataset: SugarBase taxonomy · Family	45.19(2.50)% accuracy percent · higher Uncertainty: type: standard_deviation; value: 2.5; n: 3; unit: same_as_metric Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Shallow CNN / TS: SugarBase taxonomy · Family Fixed backbone; compare adaptation strategies, not standalone foundation models. SugarBase taxonomy: motif-frequency K-means cluster allocation 8:1:1. Aggregation: Not reported GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Family
Configuration: Shallow CNN / TS	Protocol: SugarBase taxonomy · Genus (GlycanML taxonomy prediction) Dataset: SugarBase taxonomy · Genus	40.19(1.54)% accuracy percent · higher Uncertainty: type: standard_deviation; value: 1.54; n: 3; unit: same_as_metric Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Shallow CNN / TS: SugarBase taxonomy · Genus Fixed backbone; compare adaptation strategies, not standalone foundation models. SugarBase taxonomy: motif-frequency K-means cluster allocation 8:1:1. Aggregation: Not reported GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Genus
Configuration: Shallow CNN / TS	Protocol: SugarBase taxonomy · Species (GlycanML taxonomy prediction) Dataset: SugarBase taxonomy · Species	35.84(1.20)% accuracy percent · higher Uncertainty: type: standard_deviation; value: 1.2; n: 3; unit: same_as_metric Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Shallow CNN / TS: SugarBase taxonomy · Species Fixed backbone; compare adaptation strategies, not standalone foundation models. SugarBase taxonomy: motif-frequency K-means cluster allocation 8:1:1. Aggregation: Not reported GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Species
Configuration: Shallow CNN / TS	Protocol: SugarBase taxonomy · Phylum (GlycanML taxonomy prediction) Dataset: SugarBase taxonomy · Phylum	85.24(0.62)% accuracy percent · higher Uncertainty: type: standard_deviation; value: 0.62; n: 3; unit: same_as_metric Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Shallow CNN / TS: SugarBase taxonomy · Phylum Fixed backbone; compare adaptation strategies, not standalone foundation models. SugarBase taxonomy: motif-frequency K-means cluster allocation 8:1:1. Aggregation: Not reported GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Phylum
Configuration: Shallow CNN / TS	Protocol: SugarBase taxonomy · Domain (GlycanML taxonomy prediction) Dataset: SugarBase taxonomy · Domain	93.58(0.50)% accuracy percent · higher Uncertainty: type: standard_deviation; value: 0.5; n: 3; unit: same_as_metric Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Shallow CNN / TS: SugarBase taxonomy · Domain Fixed backbone; compare adaptation strategies, not standalone foundation models. SugarBase taxonomy: motif-frequency K-means cluster allocation 8:1:1. Aggregation: Not reported GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Domain
Configuration: Shallow CNN / TS	Protocol: SugarBase taxonomy · Order (GlycanML taxonomy prediction) Dataset: SugarBase taxonomy · Order	47.08(0.60)% accuracy percent · higher Uncertainty: type: standard_deviation; value: 0.6; n: 3; unit: same_as_metric Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Shallow CNN / TS: SugarBase taxonomy · Order Fixed backbone; compare adaptation strategies, not standalone foundation models. SugarBase taxonomy: motif-frequency K-means cluster allocation 8:1:1. Aggregation: Not reported GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Order

Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.

Use this model

How it works, versions and access

How it works

Evaluation in this paper

Backbone: Shallow CNN; adaptation: TS.

Sources

GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 4, Shallow CNN, TS, column Domain

Strengths, limitations and unresolved questions

Strengths and limitations

Strengths and considerations

No source-reviewed explanatory claims are recorded here yet.

Limitations and conditions

No source-reviewed explanatory claims are recorded here yet.

Profile review details

Primary-source transcription and separate automated review. No human sign-off or experimental reproduction.

Stable record: paper-model-c2fd4b76b243d83170

Specifications

Inputs, training, access and other details

Explanatory profile: limited source coverage · Automated source review, 2026-09-17. Review applies to the cited claims; unresolved fields are listed below. Numerical results retain their own review status.

Inputs, outputs and configuration
Property	Description and evidence
Model type	Not extracted or verified for this record.
Inputs	Not extracted or verified for this record.
Outputs	Not extracted or verified for this record.
Parameters	Not extracted or verified for this record.
Known versions	Not extracted or verified for this record.
Training data	Not extracted or verified for this record.
Context limits	Not extracted or verified for this record.
Access	Not extracted or verified for this record.
Code licence	Not extracted or verified for this record.
Weights licence	Not extracted or verified for this record.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

2 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statement	Original source and location	Review and provenance
Evaluation in this paper Backbone: Shallow CNN; adaptation: TS. Individual claims	GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning Original source ↗ Table 4, Shallow CNN, TS, column Domain Version: arXiv:2405.16206v1, 2024-05-25 Retrieved: 2026-09-16T21:04:56.017006+00:00	source checked automated source review · 2026-09-17 Audit details Primary-source transcription and separate automated review. No human sign-off or experimental reproduction. Field: `attributes.profile.sections.0.body` Source artifact SHA-256: `9ba3db678b4550898a612b42e8832bf9dee40935090fc4d969ba8f6ac5106979` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact
Introduction Shallow CNN / TS as evaluated in the cited study. Backbone: Shallow CNN; adaptation: TS. Individual claims	GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning Original source ↗ Table 4, Shallow CNN, TS, column Domain Version: arXiv:2405.16206v1, 2024-05-25 Retrieved: 2026-09-16T21:04:56.017006+00:00	source checked automated source review · 2026-09-17 Audit details Primary-source transcription and separate automated review. No human sign-off or experimental reproduction. Field: `attributes.profile.summary` Source artifact SHA-256: `9ba3db678b4550898a612b42e8832bf9dee40935090fc4d969ba8f6ac5106979` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact

All evidence (CSV)All evidence (JSONL)How to read the evidence

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: needs review

1 source records and release history

GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Original source · arXiv:2405.16206v1, 2024-05-25

Download this release

Technical metadata and extraction receipts

Stable ID: paper-model-c2fd4b76b243d83170

areas: glycomics
entity level: method
configuration type: reported_configuration
version: Backbone: Shallow CNN; adaptation: TS.
legacy kinds: model
entity classification: review date: 2026-09-17; rationale: This source-scoped entry preserves the method/configuration actually named in an evaluation. It is neither a global family identity nor proof of an immutable checkpoint; the linked evaluation retains adaptation, fitting and scoring details.; source ids: expansion-p3-glycanml-2405-16206v1; source locator: Table 4, Shallow CNN, TS, column Domain; ambiguities: Configuration means the source-labelled evaluated identity. It does not establish missing checkpoint hashes, default settings or equivalence to same-named records in other papers.

Related records

Suggest a correction