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DRfold commit pre-release-4-g9586990 (Ludaic and Elofsson 2026 RNA benchmark run)

DRfold run by Ludaic and Elofsson with default settings on their 2026 RNA structure benchmark.

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4 evaluations · 4 results. Different protocols are not a single leaderboard.

Sorted by Success rate (TM-score above the CASP16 threshold) (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.

Tested configuration	Protocol and dataset	Success rate (TM-score above the CASP16 threshold)	TM score
DRfold commit pre-release-4-g9586990 (Ludaic and Elofsson 2026 RNA benchmark run)Evaluation	Ludaic and Elofsson 2026 Monomeric RNA easy set, TM-score success rate, Ludaic and Elofsson 2026 Monomeric RNA easy set	36.7% (best in column)	Not reported
DRfold commit pre-release-4-g9586990 (Ludaic and Elofsson 2026 RNA benchmark run)Evaluation	Ludaic and Elofsson 2026 Monomeric RNA hard set, TM-score success rate, Ludaic and Elofsson 2026 Monomeric RNA hard set	2.04%	Not reported
DRfold commit pre-release-4-g9586990 (Ludaic and Elofsson 2026 RNA benchmark run)Evaluation	Ludaic and Elofsson 2026 Monomeric RNA easy set, mean TM-score, Ludaic and Elofsson 2026 Monomeric RNA easy set	Not reported	0.458 (best in column)
DRfold commit pre-release-4-g9586990 (Ludaic and Elofsson 2026 RNA benchmark run)Evaluation	Ludaic and Elofsson 2026 Monomeric RNA hard set, mean TM-score, Ludaic and Elofsson 2026 Monomeric RNA hard set	Not reported	0.237

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Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: DRfold commit pre-release-4-g9586990 (Ludaic and Elofsson 2026 RNA benchmark run)	Protocol: Ludaic and Elofsson 2026 Monomeric RNA easy set, mean TM-score Dataset: Ludaic and Elofsson 2026 Monomeric RNA easy set	0.458 TM score unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DRfold on Monomeric RNA easy set (TM-score) lit-rna-20261011-rna3d-protocol-monomer-easy-mean-tm-score Aggregation: Not reported Limits of deep-learning-based RNA prediction methods · Table 2, row 'DRfold', column 'TM-score'
Configuration: DRfold commit pre-release-4-g9586990 (Ludaic and Elofsson 2026 RNA benchmark run)	Protocol: Ludaic and Elofsson 2026 Monomeric RNA easy set, TM-score success rate Dataset: Ludaic and Elofsson 2026 Monomeric RNA easy set	36.7% Success rate (TM-score above the CASP16 threshold) percent · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DRfold on Monomeric RNA easy set (TM-score, success rate) lit-rna-20261011-rna3d-protocol-monomer-easy-success-tm-score Aggregation: Not reported Limits of deep-learning-based RNA prediction methods: Supplementary Data; Limits of deep-learning-based RNA prediction methods · Supplementary Table S6, row 'TM-score', column 'DRfold'
Configuration: DRfold commit pre-release-4-g9586990 (Ludaic and Elofsson 2026 RNA benchmark run)	Protocol: Ludaic and Elofsson 2026 Monomeric RNA hard set, mean TM-score Dataset: Ludaic and Elofsson 2026 Monomeric RNA hard set	0.237 TM score unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DRfold on Monomeric RNA hard set (TM-score) lit-rna-20261011-rna3d-protocol-monomer-hard-mean-tm-score Aggregation: Not reported Limits of deep-learning-based RNA prediction methods · Table 3, row 'DRfold', column 'TM-score'
Configuration: DRfold commit pre-release-4-g9586990 (Ludaic and Elofsson 2026 RNA benchmark run)	Protocol: Ludaic and Elofsson 2026 Monomeric RNA hard set, TM-score success rate Dataset: Ludaic and Elofsson 2026 Monomeric RNA hard set	2.04% Success rate (TM-score above the CASP16 threshold) percent · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source DRfold on Monomeric RNA hard set (TM-score, success rate) lit-rna-20261011-rna3d-protocol-monomer-hard-success-tm-score Aggregation: Not reported Limits of deep-learning-based RNA prediction methods: Supplementary Data; Limits of deep-learning-based RNA prediction methods · Supplementary Table S7, row 'TM-score', column 'DRfold'

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2 source records and release history

Limits of deep-learning-based RNA prediction methods: Supplementary Data · Original source · gkag813_supplemental_file.pdf from the Europe PMC supplementary files archive for PMC13501138
Limits of deep-learning-based RNA prediction methods · Original source · Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML

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Technical metadata and extraction receipts

Stable ID: lit-rna-20261011-rna3d-config-drfold-ludaic2026

areas: rna-transcriptomes; protein-structure
contexts: research
method types: specialist
reported name: DRfold
version: commit pre-release-4-g9586990
parameters: Default settings; one NVIDIA DGX-A100 GPU; shared MSAs (rMSA against RNAcentral and NCBI nt for RNA, MMseqs2 on the ColabFold databases for protein) supplied where the method accepts custom MSAs; five models generated with the same seed and the top-ranked model analysed (native ranking score, else mean pLDDT, else the first or only model)
access reuse: Not stated in the source beyond the software version; see the method's own release
foundation model eligible: false
source locator: Supplementary Table S1 row 'DRfold'; Methods 'Model generation'

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configuration of: DRfold
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system: DRfold on Monomeric RNA easy set (INF)
system: DRfold on Monomeric RNA easy set (lDDT)
system: DRfold on Monomeric RNA easy set (TM-score)
system: DRfold on Monomeric RNA easy set (GDT-TS, success rate)
system: DRfold on Monomeric RNA easy set (INF, success rate)
system: DRfold on Monomeric RNA easy set (lDDT, success rate)
system: DRfold on Monomeric RNA easy set (TM-score, success rate)
system: DRfold on Monomeric RNA hard set (GDT-TS)
system: DRfold on Monomeric RNA hard set (INF)
system: DRfold on Monomeric RNA hard set (lDDT)
system: DRfold on Monomeric RNA hard set (TM-score)
system: DRfold on Monomeric RNA hard set (GDT-TS, success rate)
system: DRfold on Monomeric RNA hard set (INF, success rate)
system: DRfold on Monomeric RNA hard set (lDDT, success rate)
system: DRfold on Monomeric RNA hard set (TM-score, success rate)

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