phyloP-30way (zero-shot, GUANinE v1.1)
phyloP-30way: Regime M (MSA-based method); evaluation zero-shot.
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Evaluations and results
1 evaluation · 1 result. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: phyloP-30way (zero-shot, GUANinE v1.1) | Protocol: GUANinE v1.1 cadd-snv, Spearman rho x100 (Table 3) Dataset: GUANinE cadd-snv test set | 28.7 Spearman (GUANinE v1.1 test set) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourcephyloP-30way on GUANinE cadd-snv lit-genomics-20261011-guanine-protocol-cadd-snv Aggregation: Not reported GUANinE v1.1 reveals complementarity of supervised and genomic language models · Table 3, row 'phyloP-30way', column 'cadd-snv' (ρ) |
Source checking is not independent reproduction. Release 2026-10-22-1b7cf027e4f6.
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Sources and history
Release 2026-10-22-1b7cf027e4f6 · Record review: source checked
1 source record and release history
- GUANinE v1.1 reveals complementarity of supervised and genomic language models · Original source · Bioinformatics 2026, btag427 (issue date 2026-08-01); PMC13501288 full-text XML
Technical metadata and extraction receipts
Stable ID: lit-genomics-20261011-guanine-config-phylop-30way-zs
- areas
- dna-genomes
- contexts
- research
- method types
- conventional_pipeline
- reported name
- phyloP-30way
- foundation model eligible
- false
- parameters
- Regime M (MSA-based method); evaluation zero-shot; context column ''
- source locator
- Table 3 row 'phyloP-30way', columns Reg., Eval. and Context
- access reuse
- Not stated in the source; see the model's own release
- missing metadata
- version: reason: unreported; note: Only the printed row label identifies the checkpoint
- provenance note
- phyloP-30way as evaluated in GUANinE v1.1.
Related records
- configuration of: phyloP
- system: phyloP-30way on GUANinE cadd-snv