JanusDNA_72_wo (GENEB leaderboard)
JanusDNA_72_wo: frozen embeddings; leaderboard display name 'JanusDNA_72_wo'.
Overview
An explanatory profile has not yet been reviewed for this record.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
3 evaluations · 45 results. Different protocols are not a single leaderboard.
Dataset: GENEB 100 tasks
Sorted by MCC (1-shot; category 'Chromatin Acc.') (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.
| Tested configuration | Protocol and dataset | MCC (1-shot; category 'Chromatin Acc.') | MCC (1-shot; category 'Coding/NC') | MCC (1-shot; category 'DNA Methyl.') | MCC (1-shot; category 'Enhancers') | MCC (1-shot; category 'Histone Mod.') | MCC (1-shot; category 'lncRNA') | MCC (1-shot; category 'Mouse Enh.') | MCC (1-shot; category 'Promoters') | MCC (1-shot; category 'Regulatory') | MCC (1-shot; category 'Species Clf.') | MCC (1-shot; category 'Splice Sites') | MCC (1-shot; category 'TF Binding') | MCC (1-shot; category 'Virus/Phage') | MCC (1-shot; macro average: unweighted mean of the 13 category MCCs) | MCC (1-shot; micro average: mean over all 100 tasks) | MCC (10-shot; category 'Chromatin Acc.') | MCC (10-shot; category 'Coding/NC') | MCC (10-shot; category 'DNA Methyl.') | MCC (10-shot; category 'Enhancers') | MCC (10-shot; category 'Histone Mod.') | MCC (10-shot; category 'lncRNA') | MCC (10-shot; category 'Mouse Enh.') | MCC (10-shot; category 'Promoters') | MCC (10-shot; category 'Regulatory') | MCC (10-shot; category 'Species Clf.') | MCC (10-shot; category 'Splice Sites') | MCC (10-shot; category 'TF Binding') | MCC (10-shot; category 'Virus/Phage') | MCC (10-shot; macro average: unweighted mean of the 13 category MCCs) | MCC (10-shot; micro average: mean over all 100 tasks) | MCC (full training data; category 'Chromatin Acc.') | MCC (full training data; category 'Coding/NC') | MCC (full training data; category 'DNA Methyl.') | MCC (full training data; category 'Enhancers') | MCC (full training data; category 'Histone Mod.') | MCC (full training data; category 'lncRNA') | MCC (full training data; category 'Mouse Enh.') | MCC (full training data; category 'Promoters') | MCC (full training data; category 'Regulatory') | MCC (full training data; category 'Species Clf.') | MCC (full training data; category 'Splice Sites') | MCC (full training data; category 'TF Binding') | MCC (full training data; category 'Virus/Phage') | MCC (full training data; macro average: unweighted mean of the 13 category MCCs) | MCC (full training data; micro average: mean over all 100 tasks) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| JanusDNA_72_wo (GENEB leaderboard)Evaluation | GENEB leaderboard, 1-shot, MCC aggregates | 0.233 | 0.343 | -0.00057 | 0.153 | 0.0766 | 0.0106 | -0.000995 | 0.303 | 0.0961 | 0.0984 | 0.059 | 0.0635 | 0.0309 | 0.113 | 0.121 | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported |
| JanusDNA_72_wo (GENEB leaderboard)Evaluation | GENEB leaderboard, 10-shot, MCC aggregates | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | 0.421 | 0.599 | 0.0421 | 0.286 | 0.173 | -0.00463 | 0.0372 | 0.447 | 0.158 | 0.192 | 0.123 | 0.124 | 0.0312 | 0.202 | 0.213 | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported |
| JanusDNA_72_wo (GENEB leaderboard)Evaluation | GENEB leaderboard, full training data, MCC aggregates | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | Not reported | 0.539 | 0.758 | 0.132 | 0.411 | 0.336 | 0.107 | 0.304 | 0.64 | 0.32 | 0.425 | 0.277 | 0.52 | 0.229 | 0.384 | 0.389 |
All 45 result rows with coverage, uncertainty and sources
Filter evaluations
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.421 MCC (10-shot; category 'Chromatin Acc.') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.Chromatin Acc.' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.599 MCC (10-shot; category 'Coding/NC') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.Coding/NC' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.0421 MCC (10-shot; category 'DNA Methyl.') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.DNA Methyl.' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.286 MCC (10-shot; category 'Enhancers') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.Enhancers' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.173 MCC (10-shot; category 'Histone Mod.') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.Histone Mod.' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | -0.00463 MCC (10-shot; category 'lncRNA') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.lncRNA' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.202 MCC (10-shot; macro average: unweighted mean of the 13 category MCCs) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'macro_MCC' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.213 MCC (10-shot; micro average: mean over all 100 tasks) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'micro_MCC' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.0372 MCC (10-shot; category 'Mouse Enh.') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.Mouse Enh.' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.447 MCC (10-shot; category 'Promoters') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.Promoters' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.158 MCC (10-shot; category 'Regulatory') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.Regulatory' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.192 MCC (10-shot; category 'Species Clf.') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.Species Clf.' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.123 MCC (10-shot; category 'Splice Sites') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.Splice Sites' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.124 MCC (10-shot; category 'TF Binding') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.TF Binding' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 10-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.0312 MCC (10-shot; category 'Virus/Phage') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (10-shot) lit-genomics-20261011-geneb-protocol-10shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.10shot, model 'JanusDNA_72_wo', key 'cat_MCC.Virus/Phage' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 1-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.233 MCC (1-shot; category 'Chromatin Acc.') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (1-shot) lit-genomics-20261011-geneb-protocol-1shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'JanusDNA_72_wo', key 'cat_MCC.Chromatin Acc.' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 1-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.343 MCC (1-shot; category 'Coding/NC') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (1-shot) lit-genomics-20261011-geneb-protocol-1shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'JanusDNA_72_wo', key 'cat_MCC.Coding/NC' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 1-shot, MCC aggregates Dataset: GENEB 100 tasks | -0.00057 MCC (1-shot; category 'DNA Methyl.') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (1-shot) lit-genomics-20261011-geneb-protocol-1shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'JanusDNA_72_wo', key 'cat_MCC.DNA Methyl.' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 1-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.153 MCC (1-shot; category 'Enhancers') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (1-shot) lit-genomics-20261011-geneb-protocol-1shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'JanusDNA_72_wo', key 'cat_MCC.Enhancers' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 1-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.0766 MCC (1-shot; category 'Histone Mod.') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (1-shot) lit-genomics-20261011-geneb-protocol-1shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'JanusDNA_72_wo', key 'cat_MCC.Histone Mod.' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 1-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.0106 MCC (1-shot; category 'lncRNA') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (1-shot) lit-genomics-20261011-geneb-protocol-1shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'JanusDNA_72_wo', key 'cat_MCC.lncRNA' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 1-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.113 MCC (1-shot; macro average: unweighted mean of the 13 category MCCs) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (1-shot) lit-genomics-20261011-geneb-protocol-1shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'JanusDNA_72_wo', key 'macro_MCC' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 1-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.121 MCC (1-shot; micro average: mean over all 100 tasks) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (1-shot) lit-genomics-20261011-geneb-protocol-1shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'JanusDNA_72_wo', key 'micro_MCC' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 1-shot, MCC aggregates Dataset: GENEB 100 tasks | -0.000995 MCC (1-shot; category 'Mouse Enh.') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (1-shot) lit-genomics-20261011-geneb-protocol-1shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'JanusDNA_72_wo', key 'cat_MCC.Mouse Enh.' |
| Configuration: JanusDNA_72_wo (GENEB leaderboard) | Protocol: GENEB leaderboard, 1-shot, MCC aggregates Dataset: GENEB 100 tasks | 0.303 MCC (1-shot; category 'Promoters') unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceJanusDNA_72_wo on GENEB (1-shot) lit-genomics-20261011-geneb-protocol-1shot Aggregation: Not reported GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'JanusDNA_72_wo', key 'cat_MCC.Promoters' |
Source checking is not independent reproduction. Release 2026-10-22-1b7cf027e4f6.
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Evidence
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Evidence table
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Sources and history
Release 2026-10-22-1b7cf027e4f6 · Record review: source checked
1 source record and release history
- GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · Original source · Git commit 9642d481e40c0af23995dcd162b779613f789f97 (repository pushed 2026-08-22)
Technical metadata and extraction receipts
Stable ID: lit-genomics-20261011-geneb-config-janusdna-72-wo
- areas
- dna-genomes
- contexts
- research
- method types
- foundation_model
- reported name
- JanusDNA_72_wo
- foundation model eligible
- true
- parameters
- 1980000 parameters as listed; frozen embeddings; leaderboard display name 'JanusDNA_72_wo'
- access reuse
- Public checkpoint as named on the leaderboard
- version
- JanusDNA_72_wo
- source locator
- leaderboard.json data.full row model 'JanusDNA_72_wo'
- provenance note
- JanusDNA_72_wo as evaluated on the GENEB leaderboard.
Related records
- configuration of: JanusDNA
- system: JanusDNA_72_wo on GENEB (10-shot)
- system: JanusDNA_72_wo on GENEB (1-shot)
- system: JanusDNA_72_wo on GENEB (full training data)