Pangolin (AlphaGenome Atlas v1 DNM1 screen comparison)
Pangolin splice score for each variant in the DNM1 minigene screen.
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Evaluations and results
1 evaluation · 1 result. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Pangolin (AlphaGenome Atlas v1 DNM1 screen comparison) | Protocol: DNM1 minigene screen, active versus inactive variants, average precision (AlphaGenome Atlas) Dataset: DNM1 intron saturation mutagenesis minigene splicing screen (AlphaGenome Atlas Data S1) | 0.939 Average precision (DNM1 minigene screen, active vs inactive variants) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePangolin on the DNM1 minigene splicing screen (AlphaGenome Atlas fig. S9E) ag-atlas-20261019-protocol-dnm1-active-variant-ap Aggregation: Not reported AlphaGenome Atlas: in silico mutagenesis of the entire human genome (Cheng, Taylor, Nicolaisen et al., medRxiv 2026) · fig. S9E legend entry 'Pangolin (AP=0.939)' (page 60) |
Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.
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Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
1 source record and release history
- AlphaGenome Atlas: in silico mutagenesis of the entire human genome (Cheng, Taylor, Nicolaisen et al., medRxiv 2026) · Original source · medRxiv preprint version 1, posted 2026-09-20; full-text PDF with supplementary figures and tables (83 pages)
Technical metadata and extraction receipts
Stable ID: ag-atlas-20261019-config-pangolin
- areas
- dna-genomes
- contexts
- research
- method types
- specialist
- reported name
- Pangolin
- source locator
- Results 'AVI prioritization helped resolve...' paragraph 3; fig. S9E legend
- missing metadata
- parameters: reason: unreported; note: Scoring settings not printed.
Related records
- configuration of: Pangolin
- system: Pangolin on the DNM1 minigene splicing screen (AlphaGenome Atlas fig. S9E)