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Source

GlycanGT published supplementary archive, Table S4

Bioinformatics · Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493

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Results

Values as the source printed them. Compare results only under compatible protocols, datasets and metrics.

Model or configurationMetricValueDatasetEvaluation
GlycanAAAccuracy0.74646666666666595 ± 0.0136313364470742 fractionSugarBase taxonomy class; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML class Accuracy: GlycanGT study: class Accuracy
GlycanAAMacro F10.41666666666666602 ± 0.0177798575172393 unitlessSugarBase taxonomy class; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML class Macro-F1: GlycanGT study: class Macro-F1
GlycanAAAccuracy0.93473333333333297 ± 0.0117457793838184 fractionSugarBase taxonomy domain; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML domain Accuracy: GlycanGT study: domain Accuracy
GlycanAAMacro F10.62916666666666599 ± 0.011393126582871499 unitlessSugarBase taxonomy domain; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML domain Macro-F1: GlycanGT study: domain Macro-F1
GlycanAAAccuracy0.43126666666666602 ± 0.086080911550315997 fractionSugarBase taxonomy family; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML family Accuracy: GlycanGT study: family Accuracy
GlycanAAMacro F10.212166666666666 ± 0.015383215961993499 unitlessSugarBase taxonomy family; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML family Macro-F1: GlycanGT study: family Macro-F1
GlycanAAAccuracy0.38300000000000001 ± 0.0324371700368574 fractionSugarBase taxonomy genus; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML genus Accuracy: GlycanGT study: genus Accuracy
GlycanAAMacro F10.18640000000000001 ± 0.0119478031453485 unitlessSugarBase taxonomy genus; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML genus Macro-F1: GlycanGT study: genus Macro-F1
GlycanAAAccuracy0.96950000000000003 ± 0 fractionGlyConnect glycosylation; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML glycosylation Accuracy: GlycanGT study: glycosylation Accuracy
GlycanAAMacro F10.95226666666666604 ± 0.0018475208614067899 unitlessGlyConnect glycosylation; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML glycosylation Macro-F1: GlycanGT study: glycosylation Macro-F1
GlycanAAAccuracy0.86209999999999998 ± 0 fractionSugarBase immunogenicity; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML immunogenicity Accuracy: GlycanGT study: immunogenicity Accuracy
GlycanAAAUPRC0.70573333333333299 ± 0.069754736995657304 unitlessSugarBase immunogenicity; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML immunogenicity AUPRC: GlycanGT study: immunogenicity AUPRC
GlycanAAAccuracy0.92420000000000002 ± 0.015649920127591699 fractionSugarBase taxonomy kingdom; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML kingdom Accuracy: GlycanGT study: kingdom Accuracy
GlycanAAMacro F10.59389999999999998 ± 0.095006157695172497 unitlessSugarBase taxonomy kingdom; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML kingdom Macro-F1: GlycanGT study: kingdom Macro-F1
GlycanAAAccuracy0.49836666666666601 ± 0.0066335008354060998 fractionSugarBase taxonomy order; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML order Accuracy: GlycanGT study: order Accuracy
GlycanAAMacro F10.2727 ± 0.0137720731917892 unitlessSugarBase taxonomy order; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML order Macro-F1: GlycanGT study: order Macro-F1
GlycanAAAccuracy0.86686666666666601 ± 0.0142043420591498 fractionSugarBase taxonomy phylum; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML phylum Accuracy: GlycanGT study: phylum Accuracy
GlycanAAMacro F10.440066666666666 ± 0.0041428653530296202 unitlessSugarBase taxonomy phylum; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML phylum Macro-F1: GlycanGT study: phylum Macro-F1
GlycanAAAccuracy0.40549999999999897 ± 0.0054836119483420804 fractionSugarBase taxonomy species; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML species Accuracy: GlycanGT study: species Accuracy
GlycanAAMacro F10.15840000000000001 ± 0.012304064369142401 unitlessSugarBase taxonomy species; GlycanML official motif split (GlycanML split)GlycanAA on GlycanML species Macro-F1: GlycanGT study: species Macro-F1
GlycanGTAccuracy0.69350743561842498 ± 0.0072451883770178003 fractionSugarBase taxonomy class; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML class Accuracy: GlycanGT study: class Accuracy
GlycanGTMacro F10.39715349769695701 ± 0.0084870172846663004 unitlessSugarBase taxonomy class; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML class Macro-F1: GlycanGT study: class Macro-F1
GlycanGTAccuracy0.92020311933260801 ± 0.0077199117351442002 fractionSugarBase taxonomy domain; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML domain Accuracy: GlycanGT study: domain Accuracy
GlycanGTMacro F10.73873655202321897 ± 0.023629706943064301 unitlessSugarBase taxonomy domain; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML domain Macro-F1: GlycanGT study: domain Macro-F1
GlycanGTAccuracy0.463184620964816 ± 0.0078717934037760007 fractionSugarBase taxonomy family; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML family Accuracy: GlycanGT study: family Accuracy
GlycanGTMacro F10.24638700174167499 ± 0.004794223931708 unitlessSugarBase taxonomy family; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML family Macro-F1: GlycanGT study: family Macro-F1
GlycanGTAccuracy0.44577439245556699 ± 0.0045302850913300002 fractionSugarBase taxonomy genus; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML genus Accuracy: GlycanGT study: genus Accuracy
GlycanGTMacro F10.188457844899896 ± 0.0007473331496721 unitlessSugarBase taxonomy genus; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML genus Macro-F1: GlycanGT study: genus Macro-F1
GlycanGTAccuracy0.98295454545454497 ± 0 fractionGlyConnect glycosylation; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML glycosylation Accuracy: GlycanGT study: glycosylation Accuracy
GlycanGTMacro F10.932366005641867 ± 0 unitlessGlyConnect glycosylation; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML glycosylation Macro-F1: GlycanGT study: glycosylation Macro-F1
GlycanGTAccuracy0.93333333333333302 ± 0.031853807955289602 fractionSugarBase immunogenicity; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML immunogenicity Accuracy: GlycanGT study: immunogenicity Accuracy
GlycanGTAUPRC0.84419033765294005 ± 0.0036259797661145998 unitlessSugarBase immunogenicity; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML immunogenicity AUPRC: GlycanGT study: immunogenicity AUPRC
GlycanGTMacro F10.87036334625073897 ± 0.065078625040751806 unitlessSugarBase immunogenicity; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML immunogenicity Macro-F1: GlycanGT study: immunogenicity Macro-F1
GlycanGTAccuracy0.90243017772941603 ± 0.017489392022112599 fractionSugarBase taxonomy kingdom; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML kingdom Accuracy: GlycanGT study: kingdom Accuracy
GlycanGTMacro F10.66958587101112299 ± 0.082979941298309295 unitlessSugarBase taxonomy kingdom; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML kingdom Macro-F1: GlycanGT study: kingdom Macro-F1
GlycanGTAccuracy0.466086325716358 ± 0.020598144163221799 fractionSugarBase taxonomy order; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML order Accuracy: GlycanGT study: order Accuracy
GlycanGTMacro F10.278530744279541 ± 0.0086310922520820999 unitlessSugarBase taxonomy order; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML order Macro-F1: GlycanGT study: order Macro-F1
GlycanGTAccuracy0.84149437794704296 ± 0.003324320417088 fractionSugarBase taxonomy phylum; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML phylum Accuracy: GlycanGT study: phylum Accuracy
GlycanGTMacro F10.49333063993822701 ± 0.080739293560509295 unitlessSugarBase taxonomy phylum; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML phylum Macro-F1: GlycanGT study: phylum Macro-F1
GlycanGTAccuracy0.39173014145810597 ± 0.021681021594310401 fractionSugarBase taxonomy species; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML species Accuracy: GlycanGT study: species Accuracy
GlycanGTMacro F10.184571928631623 ± 0.00080738146274129995 unitlessSugarBase taxonomy species; GlycanML official motif split (GlycanML split)GlycanGT on GlycanML species Macro-F1: GlycanGT study: species Macro-F1
GraphormerAccuracy0.66340200000000005 ± 0.013518000000000001 fractionSugarBase taxonomy class; GlycanML official motif split (GlycanML split)Graphormer on GlycanML class Accuracy: GlycanGT study: class Accuracy
GraphormerMacro F10.275447 ± 0.017925 unitlessSugarBase taxonomy class; GlycanML official motif split (GlycanML split)Graphormer on GlycanML class Macro-F1: GlycanGT study: class Macro-F1
GraphormerAccuracy0.947044 ± 0.0087279999999999996 fractionSugarBase taxonomy domain; GlycanML official motif split (GlycanML split)Graphormer on GlycanML domain Accuracy: GlycanGT study: domain Accuracy
GraphormerMacro F10.53573400000000004 ± 0.098474999999999993 unitlessSugarBase taxonomy domain; GlycanML official motif split (GlycanML split)Graphormer on GlycanML domain Macro-F1: GlycanGT study: domain Macro-F1
GraphormerAccuracy0.382662 ± 0.022467999999999998 fractionSugarBase taxonomy family; GlycanML official motif split (GlycanML split)Graphormer on GlycanML family Accuracy: GlycanGT study: family Accuracy
GraphormerMacro F10.16889399999999999 ± 0.013383000000000001 unitlessSugarBase taxonomy family; GlycanML official motif split (GlycanML split)Graphormer on GlycanML family Macro-F1: GlycanGT study: family Macro-F1
GraphormerAccuracy0.38520100000000002 ± 0.017274000000000001 fractionSugarBase taxonomy genus; GlycanML official motif split (GlycanML split)Graphormer on GlycanML genus Accuracy: GlycanGT study: genus Accuracy
GraphormerMacro F10.14089399999999999 ± 0.0048110000000000002 unitlessSugarBase taxonomy genus; GlycanML official motif split (GlycanML split)Graphormer on GlycanML genus Macro-F1: GlycanGT study: genus Macro-F1
GraphormerAccuracy0.97348500000000004 ± 0.0018940000000000001 fractionGlyConnect glycosylation; GlycanML official motif split (GlycanML split)Graphormer on GlycanML glycosylation Accuracy: GlycanGT study: glycosylation Accuracy

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Protocols (21)

Dataset subsets (10)

Evaluations (103)

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Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
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27748c6c0c0bb07b0105d274fb745fd4dfe702d34b9ee367d1ddacbc71c56ab0
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GlycanGT published supplementary archive, Table S4

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Version: Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
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https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13105845/supplementaryFiles
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GlycanGT published supplementary archive, Table S4

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Version: Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
Retrieved: 2026-09-23T11:31:33.520570+00:00

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2026-09-23T11:31:33.520570+00:00
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GlycanGT published supplementary archive, Table S4

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Version: Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
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Url
https://doi.org/10.1093/bioinformatics/btag147
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GlycanGT published supplementary archive, Table S4

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Version: Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
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Venue
Bioinformatics
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GlycanGT published supplementary archive, Table S4

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Version: Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
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Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
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GlycanGT published supplementary archive, Table S4

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Version: Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
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Source metadata
GlycanGT published supplementary archive, Table S4

Original source ↗

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Version: Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
Retrieved: 2026-09-23T11:31:33.520570+00:00

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Inspected artifact

Facets: areas
1 values
  • glycans
Source metadata
GlycanGT published supplementary archive, Table S4

Original source ↗

No field-specific location recorded

Version: Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
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Source artifact SHA-256: 27748c6c0c0bb07b0105d274fb745fd4dfe702d34b9ee367d1ddacbc71c56ab0

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Record ID
model-coverage-glycangt-table-s4-20260923-source
Source metadata
GlycanGT published supplementary archive, Table S4

Original source ↗

No field-specific location recorded

Version: Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
Retrieved: 2026-09-23T11:31:33.520570+00:00

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Source artifact SHA-256: 27748c6c0c0bb07b0105d274fb745fd4dfe702d34b9ee367d1ddacbc71c56ab0

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Record type
source
Source metadata
GlycanGT published supplementary archive, Table S4

Original source ↗

No field-specific location recorded

Version: Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
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Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

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Stable ID: model-coverage-glycangt-table-s4-20260923-source

areas
glycans
url
https://doi.org/10.1093/bioinformatics/btag147
artifact url
https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13105845/supplementaryFiles
artifact sha256
27748c6c0c0bb07b0105d274fb745fd4dfe702d34b9ee367d1ddacbc71c56ab0
retrieved at
2026-09-23T11:31:33.520570+00:00
venue
Bioinformatics
version
Published Bioinformatics btag147 supplementary archive, retrieved 2026-09-23; Table_S4.xlsx SHA-256 d7c35909bac6bcb78ca8fdb32c0463f05e692f15861a8184e65e415e7216f493
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