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Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues

version of record

DOI: 10.1186/s12859-026-06538-5 Original source

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gene-regulatory signal prediction

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16 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statement	Original source and location	Review and provenance
Artifact SHA-256 77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6 Source metadata	Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues Original source ↗ No field-specific location recorded Version: version of record Retrieved: 2026-09-16T10:41:06Z	catalogued No individual claim review recorded Audit details Field: `attributes.artifact_sha256` Source artifact SHA-256: `77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact
Artifact url https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13418759/fullTextXML Source metadata	Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues Original source ↗ No field-specific location recorded Version: version of record Retrieved: 2026-09-16T10:41:06Z	catalogued No individual claim review recorded Audit details Field: `attributes.artifact_url` Source artifact SHA-256: `77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact
Doi 10.1186/s12859-026-06538-5 Source metadata	Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues Original source ↗ No field-specific location recorded Version: version of record Retrieved: 2026-09-16T10:41:06Z	catalogued No individual claim review recorded Audit details Field: `attributes.doi` Source artifact SHA-256: `77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact
Hash scope Exact retrieved primary paper artifact bytes. Source metadata	Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues Original source ↗ No field-specific location recorded Version: version of record Retrieved: 2026-09-16T10:41:06Z	catalogued No individual claim review recorded Audit details Field: `attributes.hash_scope` Source artifact SHA-256: `77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact
Retrieved at 2026-09-16T10:41:06Z Source metadata	Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues Original source ↗ No field-specific location recorded Version: version of record Retrieved: 2026-09-16T10:41:06Z	catalogued No individual claim review recorded Audit details Field: `attributes.retrieved_at` Source artifact SHA-256: `77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact
Review method 1 values automated-source-review Source metadata	Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues Original source ↗ No field-specific location recorded Version: version of record Retrieved: 2026-09-16T10:41:06Z	catalogued No individual claim review recorded Audit details Field: `attributes.review.method` Source artifact SHA-256: `77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact
Review: scope Source identification and table transcription; no independent experimental reproduction. Source metadata	Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues Original source ↗ No field-specific location recorded Version: version of record Retrieved: 2026-09-16T10:41:06Z	catalogued No individual claim review recorded Audit details Field: `attributes.review.scope` Source artifact SHA-256: `77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact
Url https://pmc.ncbi.nlm.nih.gov/articles/PMC13418759/ Source metadata	Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues Original source ↗ No field-specific location recorded Version: version of record Retrieved: 2026-09-16T10:41:06Z	catalogued No individual claim review recorded Audit details Field: `attributes.url` Source artifact SHA-256: `77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact
Version version of record Source metadata	Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues Original source ↗ No field-specific location recorded Version: version of record Retrieved: 2026-09-16T10:41:06Z	catalogued No individual claim review recorded Audit details Field: `attributes.version` Source artifact SHA-256: `77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact
Description Primary reference; inspect retrieval status and review scope. Source metadata	Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues Original source ↗ No field-specific location recorded Version: version of record Retrieved: 2026-09-16T10:41:06Z	catalogued No individual claim review recorded Audit details Field: `description` Source artifact SHA-256: `77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact

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Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

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Technical metadata and extraction receipts

Stable ID: expansion-p3-single-cell-residual-geometry-2026

url: https://pmc.ncbi.nlm.nih.gov/articles/PMC13418759/
doi: 10.1186/s12859-026-06538-5
version: version of record
retrieved at: 2026-09-16T10:41:06Z
artifact sha256: 77546faec51cfb5c78b73c5943f940c4e0097d130b1ddde4ab8287b507b36df6
artifact url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13418759/fullTextXML
hash scope: Exact retrieved primary paper artifact bytes.
review: scope: Source identification and table transcription; no independent experimental reproduction.; method: automated-source-review

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