Source

Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002)

Primary source retrieved and hashed for the CNV detection use-case pass.

Evidence

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Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

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19 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-09-8eac2440869c
Property and statement	Original source and location	Review and provenance
attributes.artifact_sha256 1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14 Source metadata	Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002) Original source ↗ No field-specific location recorded Version: TableS1.xlsx inside biomedicines-13-01949-s001.zip Retrieved: 2026-10-09T15:28:17Z	catalogued No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit details Field: `attributes.artifact_sha256` Source artifact SHA-256: `1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14` Hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Inspected artifact
attributes.artifact_url https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12383524/supplementaryFiles Source metadata	Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002) Original source ↗ No field-specific location recorded Version: TableS1.xlsx inside biomedicines-13-01949-s001.zip Retrieved: 2026-10-09T15:28:17Z	catalogued No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit details Field: `attributes.artifact_url` Source artifact SHA-256: `1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14` Hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Inspected artifact
attributes.doi 10.3390/biomedicines13081949 Source metadata	Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002) Original source ↗ No field-specific location recorded Version: TableS1.xlsx inside biomedicines-13-01949-s001.zip Retrieved: 2026-10-09T15:28:17Z	catalogued No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit details Field: `attributes.doi` Source artifact SHA-256: `1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14` Hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Inspected artifact
attributes.evidence_concerns 1 values source id cnv-20261009-source-nardone2025-table-s1 message Short-read input depth and alignment for Table S1 are stated inconsistently: Methods 2.2 says the 65x reads were subsampled to 25x and aligned with bwa-mem2 for preliminary evaluations; Results 3.1 says the HG002 data were previously aligned using the DRAGEN pipeline; the Data Availability Statement cites 30x Illumina HG002 2x250 reads. Which depth and aligner produced Table S1 is not resolved, so these results should not be compared automatically with other HG002 tables. source locator Methods 2.2 paragraph 1; Results 3.1 paragraph 1; Data Availability Statement artifact sha256 45317b1396f900fd8bcbe6e95519a4b475fda4c5ee416c63752811b71e154eb8 reviewed at 2026-10-09T15:40:00Z review method automated-source-review Source metadata	Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002) Original source ↗ No field-specific location recorded Version: TableS1.xlsx inside biomedicines-13-01949-s001.zip Retrieved: 2026-10-09T15:28:17Z	catalogued No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit details Field: `attributes.evidence_concerns` Source artifact SHA-256: `1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14` Hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Inspected artifact
attributes.hash_scope artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Source metadata	Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002) Original source ↗ No field-specific location recorded Version: TableS1.xlsx inside biomedicines-13-01949-s001.zip Retrieved: 2026-10-09T15:28:17Z	catalogued No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit details Field: `attributes.hash_scope` Source artifact SHA-256: `1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14` Hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Inspected artifact
attributes.licence CC-BY-4.0 Source metadata	Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002) Original source ↗ No field-specific location recorded Version: TableS1.xlsx inside biomedicines-13-01949-s001.zip Retrieved: 2026-10-09T15:28:17Z	catalogued No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit details Field: `attributes.licence` Source artifact SHA-256: `1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14` Hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Inspected artifact
attributes.media_type application/vnd.openxmlformats-officedocument.spreadsheetml.sheet Source metadata	Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002) Original source ↗ No field-specific location recorded Version: TableS1.xlsx inside biomedicines-13-01949-s001.zip Retrieved: 2026-10-09T15:28:17Z	catalogued No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit details Field: `attributes.media_type` Source artifact SHA-256: `1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14` Hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Inspected artifact
attributes.publication_status peer_reviewed Source metadata	Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002) Original source ↗ No field-specific location recorded Version: TableS1.xlsx inside biomedicines-13-01949-s001.zip Retrieved: 2026-10-09T15:28:17Z	catalogued No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit details Field: `attributes.publication_status` Source artifact SHA-256: `1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14` Hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Inspected artifact
attributes.retrieved_at 2026-10-09T15:28:17Z Source metadata	Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002) Original source ↗ No field-specific location recorded Version: TableS1.xlsx inside biomedicines-13-01949-s001.zip Retrieved: 2026-10-09T15:28:17Z	catalogued No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit details Field: `attributes.retrieved_at` Source artifact SHA-256: `1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14` Hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Inspected artifact
attributes.url https://doi.org/10.3390/biomedicines13081949 Source metadata	Nardone et al. 2025, Table S1 (ten short-read SV callers on HG002) Original source ↗ No field-specific location recorded Version: TableS1.xlsx inside biomedicines-13-01949-s001.zip Retrieved: 2026-10-09T15:28:17Z	catalogued No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit details Field: `attributes.url` Source artifact SHA-256: `1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14` Hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only. Inspected artifact

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Sources and history

Release 2026-10-09-8eac2440869c · Record review: source checked

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Technical metadata and extraction receipts

Stable ID: cnv-20261009-source-nardone2025-table-s1

areas: dna-genomes
contexts: clinical_research
url: https://doi.org/10.3390/biomedicines13081949
artifact url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12383524/supplementaryFiles
version: TableS1.xlsx inside biomedicines-13-01949-s001.zip
retrieved at: 2026-10-09T15:28:17Z
artifact sha256: 1e84dde9132aa977c069e3ce50132247a83969316cbd7c98f238ac54db032b14
doi: 10.3390/biomedicines13081949
publication status: peer_reviewed
licence: CC-BY-4.0
media type: application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
evidence concerns: source id: cnv-20261009-source-nardone2025-table-s1; message: Short-read input depth and alignment for Table S1 are stated inconsistently: Methods 2.2 says the 65x reads were subsampled to 25x and aligned with bwa-mem2 for preliminary evaluations; Results 3.1 says the HG002 data were previously aligned using the DRAGEN pipeline; the Data Availability Statement cites 30x Illumina HG002 2x250 reads. Which depth and aligner produced Table S1 is not resolved, so these results should not be compared automatically with other HG002 tables.; source locator: Methods 2.2 paragraph 1; Results 3.1 paragraph 1; Data Availability Statement; artifact sha256: 45317b1396f900fd8bcbe6e95519a4b475fda4c5ee416c63752811b71e154eb8; reviewed at: 2026-10-09T15:40:00Z; review method: automated-source-review
hash scope: artifact_sha256 is the inner supplementary file. Containers: europepmc_supplementary_zip 86c46fdc3e9125ae8e025ac4d1c9129dd4631039abd56019581e242dc3ae3d70; biomedicines-13-01949-s001.zip 678880a4c36070dfaf0813421d82a4e2747a85cb5a85c8c886b321a58be8ecf9. The Europe PMC zip is rebuilt per request, so its hash describes one retrieval only.

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