rewirebio.iobenchmarks
← Browse all results
Result

Average precision of Corrected k-mer / position baseline on MFASS v2 eligible assay cohort

0.286 Average precision

Methods

Tested configuration
Corrected k-mer / position baseline
Protocol
MFASS v2
Dataset
MFASS v2 eligible assay cohort
Procedure
Assay-oriented 21 bp k-mer window, exon position, allele identity and conservation features; gradient-boosted trees trained on the MFASS training split.
Evaluation
Corrected k-mer / position baseline on MFASS v2
Coverage
8324/8324 scored
Uncertainty
Not reported by the source: Point estimate; see paired-comparison artifacts.
Evidence
Rewire evaluation · reproducedMFASS v2 corrected k-mer baseline: pinned upstream result JSON · JSON pointer /metrics/average_precision_sklearn

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: reproduced. Source checked does not mean independently reproduced.

Reproduction

Split
split-v2.tsv
Adaptation
Not reported
Scoring implementation
Not reported

Recompute metrics from existing predictions

This mapping supports rescoring the original held-out prediction IDs under the corrected MFASS v2 protocol. It does not regenerate model predictions or establish reproduction of the published score. Preserve the reported missing-prediction coverage.

rewirebench: MFASS guide; rewirebench: MFASS protocol code · docs/mfass.md: archived predictions; protocols/mfass.py: canonical split, score and coverage

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statementOriginal source and locationReview and provenance
Reported result
0.2864167459589237
Individual claims		MFASS v2 corrected k-mer baseline: pinned upstream result JSON

Original source ↗

JSON pointer /metrics/average_precision_sklearn

Version: bee9133b83f3aedaf2bbb9013f1875515845607e
Retrieved: 2026-09-19

reproduced

["existing-run-import"] · 2026-09-16T10:50:02Z

rewire run

Audit details

Imported existing documented own-run record, not a newly executed reproduction.

Field: attributes.printed_value

Source artifact SHA-256: 9a0b78674cc714177fec6e8c487588d6186d4fe93d6d7dbcb48bed6858885e15

Hash scope: Exact upstream JSON bytes, SHA-256 independently checked against the pinned revision

Inspected artifact

How to read the evidence

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: reproduced

4 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: rewire-result-baseline-kmer-position-v2-average-precision

areas
dna-genomes
printed value
0.2864167459589237
numeric value
0.2864167459589237
metric
average-precision
metric direction
higher
unit
fraction
source locator
JSON pointer /metrics/average_precision_sklearn
review
method: existing-run-import; reviewer: rewire-benchmark-runner; reviewed at: 2026-09-16T10:50:02Z; reviewer note: documented MFASS v2 run; note: Imported existing documented own-run record, not a newly executed reproduction.
coverage
scored: 8324; eligible: 8324
missing metadata
uncertainty: reason: unreported; note: Point estimate; see paired-comparison artifacts.
Related records

Suggest a correction