0.951 Recall
Lemur: Recall on Species profiling on Dilthey2019 simulated long reads
- Tested configuration
- Lemur
- Protocol
- Species profiling on Dilthey2019 simulated long reads (Long-read taxonomic profiling)
- Dataset
- Species profiling on Dilthey2019 simulated long reads
- Procedure
- Species-level recall/precision/F 1. MetaMaps results copied from original manuscript; other tool versions reported in Methods. 200,114 reads;96 strain design,94 strains with RefSeq species representatives; average read 4,997 bp.
- Evaluation
- Lemur: Species profiling on Dilthey2019 simulated long reads
- Coverage
- scored: unreported; eligible: unreported
- Uncertainty
- Not reported
- Evidence
- Author-reported evaluation · source checkedLightweight taxonomic profiling of long-read metagenomic datasets with Lemur and Magnet · Table 1:, row Lemur, column Recall; XML row2 column2
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Reproduction
- Split
- 200,114 reads;96 strain design,94 strains with RefSeq species representatives; average read 4,997 bp.
- Adaptation
- Paper-specific evaluated pipeline; exact checkpoint not inferred from label
- Scoring implementation
- Not reported
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Reported result 0.951 Individual claims | Lightweight taxonomic profiling of long-read metagenomic datasets with Lemur and Magnet Table 1:, row Lemur, column Recall; XML row2 column2 Version: PMC archival version PMC11185576.2 | source checked Primary-table transcription and separate automated source review · 2026-09-17 author reported Audit detailsSource checked does not mean experimentally reproduced. Field: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
View linked audit checks and correction history
Release 2026-09-29-06401fd5b220 · Record review: source checked
1 source records and release history
- Lightweight taxonomic profiling of long-read metagenomic datasets with Lemur and Magnet · Original source · PMC archival version PMC11185576.2
Technical metadata and extraction receipts
Stable ID: paper-result-80f8cca2c2d9379a1a
- areas
- microbes-communities
- tasks
- Long-read taxonomic profiling
- printed value
- 0.951
- numeric value
- 0.951
- metric
- Recall
- metric direction
- higher
- unit
- fraction
- uncertainty
- Not reported
- eligible count
- Not reported
- scored count
- Not reported
- reported population
- Not reported
- source locator
- Table 1:, row Lemur, column Recall; XML row2 column2
- source occurrences
- source id: part2-lemur-magnet-2024; locator: Table 1:, row Lemur, column Recall; XML row2 column2
- review
- method: Primary-table transcription and separate automated source review; date: 2026-09-17; note: Source checked does not mean experimentally reproduced.
- missing metadata
- scored count: unreported; eligible count: unextracted; checkpoint revision: unextracted; uncertainty: unreported