rewirebio.iobenchmarks
Result

Accuracy of E-value on FUJISAN test sub-dataset

81.9% Accuracy

Methods

Tested configuration
E-value
Protocol
Enzyme-pair functional identity: original held-out test (Enzyme functional identity prediction)
Dataset
FUJISAN test sub-dataset
Procedure
LightGBM FUJISAN and comparison methods; predictions thresholded to maximizeF 1. Protein-pair splitting is not evidence of disjoint proteins or families. 41,600 protein pairs; balanced functional-identity classes; random 56.25/18.75/25% training/validation/test split.
Evaluation
E-value: Enzyme-pair functional identity: original held-out test
Coverage
Not reported scored / Not reported eligible
Uncertainty
Not reported by the source
Evidence
Author-reported evaluation · source checkedEnhanced prediction of protein functional identity through the integration of sequence and structural features · Table 1, row E-value, column ACC (%); XML row3 column2

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split
41,600 protein pairs; balanced functional-identity classes; random 56.25/18.75/25% training/validation/test split.
Adaptation
Paper-specific evaluated pipeline; exact checkpoint not inferred from label
Scoring implementation
Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statementOriginal source and locationReview and provenance
Reported result
81.91
Individual claims
Enhanced prediction of protein functional identity through the integration of sequence and structural features

Original source ↗

Table 1, row E-value, column ACC (%); XML row3 column2

Version: PMC11609699.1
Retrieved: 2026-09-17T07:56:15.783679+00:00

source checked

["transcription","automated-source-review"] · 2026-09-17

author reported

Audit details

Source checked does not mean experimentally reproduced.

Field: attributes.printed_value

Source artifact SHA-256: db33e0542005ffae00cd644dfe697185b94c8823d5aee2768620a6db0c48e56f

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: paper-result-7a33f77a25091433d2

areas
proteins-complexes
tasks
Enzyme functional identity prediction
printed value
81.91
numeric value
81.91
metric
accuracy
metric direction
higher
unit
percent
source locator
Table 1, row E-value, column ACC (%); XML row3 column2
source occurrences
source id: part2-fujisan-2024; locator: Table 1, row E-value, column ACC (%); XML row3 column2
review
method: transcription; automated-source-review; date: 2026-09-17; note: Source checked does not mean experimentally reproduced.; method note: primary table; source review separate from transcription
missing metadata
checkpoint revision: reason: unextracted; eligible count: reason: unextracted; reported population: reason: unextracted; scored count: reason: unreported; uncertainty: reason: unreported
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