Result

71.5% AUROC

ProteinBERT LLM-encoding model · AUROC · mRNA-RBP pairs

Tested pipeline: ProteinBERT LLM-encoding model
Task: mRNA-protein interaction prediction
Dataset: mRNA-RBP pairs
Procedure: LLM encoding of protein partner; RBP-aware partition tests generalization to unseen protein diversity
Evaluation: ProteinBERT LLM-encoding model: mRNA-protein interaction prediction
Coverage: scored: unreported; eligible: unreported
Uncertainty: Not reported
Evidence: Author-reported evaluation · source checkedGeneralizable deep-learning-based mRNA-protein interaction prediction strongly depends on protein diversity · Table 2, RBP-aware test set row, auROC (%) column

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split: RBP-aware test set
Adaptation: Not reported
Scoring implementation: Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Access requirements and official instructions: mRNA-protein interaction prediction

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statement	Original source and location	Review and provenance
attributes.printed_value 71.5 Individual claims	Generalizable deep-learning-based mRNA-protein interaction prediction strongly depends on protein diversity Original source ↗ Table 2, RBP-aware test set row, auROC (%) column Version: version of record Retrieved: 2026-09-16T10:33:57.257Z	source checked primary xml exact label cell check · 2026-09-16T10:33:57.257Z author reported Audit details Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness. Field: `attributes.printed_value` Claim: claim-lit-b4-008 Source artifact SHA-256: `94f9fe22a5f0e6c8619e4af994eb4f6ded7417efcf0c1240380269280f97f9d1` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `94f9fe22a5f0e6c8619e4af994eb4f6ded7417efcf0c1240380269280f97f9d1` Extraction artifact

All evidence (CSV)All evidence (JSONL)How to read the evidence

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release history

Generalizable deep-learning-based mRNA-protein interaction prediction strongly depends on protein diversity · Original source · version of record

Download this release

Technical metadata and extraction receipts

Stable ID: lit-b4-008

areas: rna-transcriptomes
tasks: mRNA-protein interaction prediction
printed value: 71.5
numeric value: 71.5
metric: AUROC
metric direction: unknown
unit: percent
uncertainty: Not reported
source locator: Table 2, RBP-aware test set row, auROC (%) column
review: method: primary_xml_exact_label_cell_check; reviewer: rewire deterministic table checker v1; reviewed at: 2026-09-16T10:33:57.257Z; notes: Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness.; evidence: Table 2, RBP-aware test set row, auROC (%) column; cell: 71.5; artifact sha256: 94f9fe22a5f0e6c8619e4af994eb4f6ded7417efcf0c1240380269280f97f9d1; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13235059/fullTextXML
legacy id: lit-b4-008
legacy row: id: lit-b4-008; paper id: mrna-protein-diversity-2026; domain id: rna-transcriptomes; task: mRNA-protein interaction prediction; model: ProteinBERT LLM-encoding model; model version: Not reported; dataset: mRNA-RBP pairs; dataset version: Not reported; split: RBP-aware test set; metric: AUROC; value: 71.5; unit: percent; uncertainty: Not reported; protocol: LLM encoding of protein partner; RBP-aware partition tests generalization to unseen protein diversity; source locator: Table 2, RBP-aware test set row, auROC (%) column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC13235059/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:37:05Z
missing metadata: model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract

Related records

evaluation: ProteinBERT LLM-encoding model: mRNA-protein interaction prediction
subject: Reported AUROC for ProteinBERT LLM-encoding model

Suggest a correction