Weighted F1 of SPIN + ESM2-35M on TRX
0.796 Weighted F1
Methods
- Tested pipeline
- SPIN + ESM2-35M
- Task
- protein function annotation
- Dataset
- TRX
- Procedure
- frozen ESM2-35M backbone in SPIN
- Evaluation
- SPIN + ESM2-35M: protein function annotation
- Coverage
- Not reported scored / Not reported eligible
- Uncertainty
- Not yet extracted
- Evidence
- Author-reported evaluation · source checkedScaling the profile of life by function with SPIN · Table 1, ESM2-35M Test row, F1_m-w column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Reproduction
- Split
- test set
- Adaptation
- Not reported
- Scoring implementation
- Not reported
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Printed value 0.796 Individual claims | Scaling the profile of life by function with SPIN Table 1, ESM2-35M Test row, F1_m-w column Version: journal full text in PMC | source checked ["ai-assisted-source-review"] · 2026-09-16T10:38:57.558225+00:00 author reported Audit detailsResolved Test group and macro-weighted F1 subcolumn (0.796) for frozen ESM2-35M in SPIN. Test weighted accuracy is 0.798. Methods define inverse-frequency class weighting for macro-weighted F1. Field: Claim: claim-b2-spin-protein-function-2026 Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record Extraction artifact SHA-256: |
Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
1 source record and release history
- Scaling the profile of life by function with SPIN · Original source · journal full text in PMC
Technical metadata and extraction receipts
Stable ID: b2-spin-protein-function-2026
- areas
- proteins-complexes
- tasks
- protein function annotation
- printed value
- 0.796
- numeric value
- 0.796
- metric
- weighted-f1
- metric direction
- unknown
- unit
- fraction
- source locator
- Table 1, ESM2-35M Test row, F1_m-w column
- review
- method: ai-assisted-source-review; reviewer: codex; reviewed at: 2026-09-16T10:38:57.558225+00:00; evidence: Original PMC XML table headers, row groups and caption inspected; printed value 0.796.; artifact sha256: 9701843e93bf7fa3ead71e19693fb07d483f1022379871adfb04486783722a9d; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12970593/fullTextXML; method note: independent; table-level review; reviewer note: role: secondary table review; note: Resolved Test group and macro-weighted F1 subcolumn (0.796) for frozen ESM2-35M in SPIN. Test weighted accuracy is 0.798. Methods define inverse-frequency class weighting for macro-weighted F1.
- legacy id
- b2-spin-protein-function-2026
- missing metadata
- dataset version: reason: unextracted; uncertainty: reason: unextracted