rewirebio.iobenchmarks
Protocol

Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)

Whether each aberrant-splicing caller reported each established pathogenic splicing alteration as an outlier.

5 evaluations · 80 results

Overview

Whether each aberrant-splicing caller reported each established pathogenic splicing alteration as an outlier.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

5 recorded evaluations, 80 metric rows. A comparison chart has not yet been validated for these results. The table retains the individual findings and their sources.

View coverage and remaining gaps across all benchmarks

Results

Results are available, but no reviewed comparison panel is linked in this release.

All evaluations

5 evaluations · 80 results. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 1 (case DMD1), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 2 (case DMD2), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 3 (case DMD3), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 4 (case 2*), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 5 (case 7*), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 6 (case 10), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 7 (case 22), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 8 (case 28), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
No event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 9 (case 37), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 10 (case 43*), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 11 (case 49), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
No event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 12 (case 61*), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 13 (case 63), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 14 (case 63), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
No event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 15 (case 69), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.1 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.1 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 16 (case 70), column 'FRASER |ΔPSI| > 0.1'
Configuration: FRASER v1.8.1, |dPSI| > 0.3 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.3 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 1 (case DMD1), column 'FRASER |ΔPSI| > 0.3'
Configuration: FRASER v1.8.1, |dPSI| > 0.3 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.3 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 2 (case DMD2), column 'FRASER |ΔPSI| > 0.3'
Configuration: FRASER v1.8.1, |dPSI| > 0.3 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.3 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 3 (case DMD3), column 'FRASER |ΔPSI| > 0.3'
Configuration: FRASER v1.8.1, |dPSI| > 0.3 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
No event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.3 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 4 (case 2*), column 'FRASER |ΔPSI| > 0.3'
Configuration: FRASER v1.8.1, |dPSI| > 0.3 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.3 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 5 (case 7*), column 'FRASER |ΔPSI| > 0.3'
Configuration: FRASER v1.8.1, |dPSI| > 0.3 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
Yes event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.3 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 6 (case 10), column 'FRASER |ΔPSI| > 0.3'
Configuration: FRASER v1.8.1, |dPSI| > 0.3 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
No event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.3 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 7 (case 22), column 'FRASER |ΔPSI| > 0.3'
Configuration: FRASER v1.8.1, |dPSI| > 0.3 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
No event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.3 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 8 (case 28), column 'FRASER |ΔPSI| > 0.3'
Configuration: FRASER v1.8.1, |dPSI| > 0.3 (Segarra-Casas et al.)Protocol: Detection of 16 known pathogenic splicing events in clinical muscle RNA-seq (Segarra-Casas et al. Table 2)
Dataset: Segarra-Casas et al. skeletal-muscle RNA-seq cohort, 16 pathogenic splicing events
No event-detected
unitless · unknown

Uncertainty: Not applicable

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

FRASER |ΔPSI| > 0.3 on 16 known pathogenic muscle splicing events

rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

Aggregation: Not reported

Translating Muscle RNAseq Into the Clinic for the Diagnosis of Muscle Diseases · Table 2 row 9 (case 37), column 'FRASER |ΔPSI| > 0.3'

Source checking is not independent reproduction. Release 2026-10-10-7b8f80935f90.

Methods and evaluation design

Procedure, tasks and evaluated configurations

Recorded evaluations

Each evaluation records what was tested and under which conditions.

Baseline coverage

Reference methods help show what a model adds beyond simple controls. We track a null control and a conventional method for each protocol.

0 of 2 active baseline roles have published Rewire measurements in this release. Measurements on a selected protocol do not establish coverage of an entire suite.

No execution recipe linked to this protocol. Recipe availability does not establish a completed evaluation.

External evaluations
5

Literature evidence is not a Rewire measurement. Executed but unpublished runs and private review status are not included.

Null control

Proposed control: requires review

Select a task-valid null control after reviewing inputs and metric

Protocol-specific applicability, permitted inputs, access, split, evaluator and execution requirements need review before implementation or execution.

This is a suggested selection rule, not a validated method or a measured score.

Conventional reference

Proposed control: requires review

Select an upstream conventional reference after reviewing the full protocol

Protocol-specific applicability, permitted inputs, access, split, evaluator and execution requirements need review before implementation or execution.

This is a suggested selection rule, not a validated method or a measured score.

Protocol coverage CSV (gzip) · Model evaluation matrix (gzip) · Source table (gzip) · Release and checksums (gzip)

Coverage is derived from release 2026-10-10-7b8f80935f90. Source citations describe the original records; they do not validate an unreviewed baseline proposal. No results have been generated by this audit.

Run instructions

No runnable recipe has been reviewed for this protocol. Dataset access, model requirements, licences and compute requirements must be checked against its sources before execution.

Strengths, limitations and unresolved questions

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

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One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

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Claims, original sources and review scope · Release 2026-10-10-7b8f80935f90
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Sources and history

Release 2026-10-10-7b8f80935f90 · Record review: source checked

1 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: rna-splicing-20261009-protocol-segarracasas2025-known-event-detection

areas
rna-transcriptomes
contexts
clinical_research
protocol
Run each caller on the muscle RNA-seq cohort, restricted to neuromuscular-disease genes; record Yes/No per known pathogenic splicing alteration (16 events in 15 cases, including two events in case 63 and the same CAPN3 variant in cases 37 and 69).
version
Table 2
source locator
Table 2 columns 'FRASER |dPSI| > 0.1' to 'rMATS-turbo'
limitations
Events are those the authors established, partly with these same callers, so recall is measured on events at least one method could reveal.; Cohort size per run is not stated in Table 2; Results imply the full 98-sample cohort, and the footnote marks the FRASER2 call for case 2 as found only with all cohort samples (missed in batch 1, n = 34).; LeafCutterMD is not designed to report intron retention, which was part of five events (Discussion).; No false-positive or per-sample workload counts in the table; outlier counts per sample are figure-only (Figure 2A).; Prose detection rates conflict: Results give FRASER2 68.7% (11/16), Discussion gives 66.6%.
missing metadata
denominator: reason: unreported; note: Samples analysed per caller run not printed in Table 2
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