Model

FLARE

Named prediction model family identified in the cited primary source. Exact fitted configurations and scores are separate records.

3 evaluations · 9 results

Overview

Named prediction model family identified in the cited primary source. Exact fitted configurations and scores are separate records.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluations and results

3 evaluations · 9 results. Different protocols are not a single leaderboard.

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Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: FLARE [MSAlign v2]	Protocol: MSAlign v2 retrieval: massspecgym-formula-formula-oracle Dataset subset: MSAlign v2 massspecgym-formula-formula-oracle	32.8 ± 2.5% recall_at_1 percent · higher Uncertainty: type: standard_deviation; reported spread: 2.5; scope: Three random splitting seeds. Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source FLARE massspecgym-formula-formula-oracle Not reported Aggregation: Not reported MSAlign arXiv v2 Table 3 · Table 3 p7; massspecgym-formula block, R@1 row, FLARE column
Configuration: FLARE [MSAlign v2]	Protocol: MSAlign v2 retrieval: massspecgym-formula-formula-oracle Dataset subset: MSAlign v2 massspecgym-formula-formula-oracle	82.3 ± 1.5% recall_at_20 percent · higher Uncertainty: type: standard_deviation; reported spread: 1.5; scope: Three random splitting seeds. Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source FLARE massspecgym-formula-formula-oracle Not reported Aggregation: Not reported MSAlign arXiv v2 Table 3 · Table 3 p7; massspecgym-formula block, R@20 row, FLARE column
Configuration: FLARE [MSAlign v2]	Protocol: MSAlign v2 retrieval: massspecgym-formula-formula-oracle Dataset subset: MSAlign v2 massspecgym-formula-formula-oracle	61.8 ± 2.1% recall_at_5 percent · higher Uncertainty: type: standard_deviation; reported spread: 2.1; scope: Three random splitting seeds. Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source FLARE massspecgym-formula-formula-oracle Not reported Aggregation: Not reported MSAlign arXiv v2 Table 3 · Table 3 p7; massspecgym-formula block, R@5 row, FLARE column
Configuration: FLARE [MSAlign v2]	Protocol: MSAlign v2 retrieval: massspecgym-mces-formula-oracle Dataset subset: MSAlign v2 massspecgym-mces-formula-oracle	28.4 ± 2.1% recall_at_1 percent · higher Uncertainty: type: standard_deviation; reported spread: 2.1; scope: Two MCES validation/test-swapped variants per methods, despite blanket three-split table caption. Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source FLARE massspecgym-mces-formula-oracle Not reported Aggregation: Not reported MSAlign arXiv v2 Table 3 · Table 3 p7; massspecgym-mces block, R@1 row, FLARE column
Configuration: FLARE [MSAlign v2]	Protocol: MSAlign v2 retrieval: massspecgym-mces-formula-oracle Dataset subset: MSAlign v2 massspecgym-mces-formula-oracle	82.8 ± 2.8% recall_at_20 percent · higher Uncertainty: type: standard_deviation; reported spread: 2.8; scope: Two MCES validation/test-swapped variants per methods, despite blanket three-split table caption. Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source FLARE massspecgym-mces-formula-oracle Not reported Aggregation: Not reported MSAlign arXiv v2 Table 3 · Table 3 p7; massspecgym-mces block, R@20 row, FLARE column
Configuration: FLARE [MSAlign v2]	Protocol: MSAlign v2 retrieval: massspecgym-mces-formula-oracle Dataset subset: MSAlign v2 massspecgym-mces-formula-oracle	60.2 ± 1.4% recall_at_5 percent · higher Uncertainty: type: standard_deviation; reported spread: 1.4; scope: Two MCES validation/test-swapped variants per methods, despite blanket three-split table caption. Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source FLARE massspecgym-mces-formula-oracle Not reported Aggregation: Not reported MSAlign arXiv v2 Table 3 · Table 3 p7; massspecgym-mces block, R@5 row, FLARE column
Configuration: FLARE [MSAlign v2]	Protocol: MSAlign v2 retrieval: spectraverse-formula-oracle Dataset subset: MSAlign v2 spectraverse-formula-oracle	14.2 ± 1.1% recall_at_1 percent · higher Uncertainty: type: standard_deviation; reported spread: 1.1; scope: Three random splitting seeds. Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source FLARE spectraverse-formula-oracle Not reported Aggregation: Not reported MSAlign arXiv v2 Table 3 · Table 3 p7; spectraverse block, R@1 row, FLARE column
Configuration: FLARE [MSAlign v2]	Protocol: MSAlign v2 retrieval: spectraverse-formula-oracle Dataset subset: MSAlign v2 spectraverse-formula-oracle	60.3 ± 2.0% recall_at_20 percent · higher Uncertainty: type: standard_deviation; reported spread: 2.0; scope: Three random splitting seeds. Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source FLARE spectraverse-formula-oracle Not reported Aggregation: Not reported MSAlign arXiv v2 Table 3 · Table 3 p7; spectraverse block, R@20 row, FLARE column
Configuration: FLARE [MSAlign v2]	Protocol: MSAlign v2 retrieval: spectraverse-formula-oracle Dataset subset: MSAlign v2 spectraverse-formula-oracle	34.7 ± 2.6% recall_at_5 percent · higher Uncertainty: type: standard_deviation; reported spread: 2.6; scope: Three random splitting seeds. Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source FLARE spectraverse-formula-oracle Not reported Aggregation: Not reported MSAlign arXiv v2 Table 3 · Table 3 p7; spectraverse block, R@5 row, FLARE column

Source checking is not independent reproduction. Release 2026-09-30-e37e3ab1284d.

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FLARE [MSAlign v2] · variant of

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MSAlign arXiv v2 Table 3 · Original source · 2605.19752v2, 25 September 2026

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Technical metadata and extraction receipts

Stable ID: uc20260930-model-flare

areas: metabolomics
source locator: Table 3 source column FLARE; Section 5.1 Baselines
review: method: automated_source_review; reviewer: Codex experimental-use-case curation; date: 2026-09-30; reviewed at: 2026-09-30T21:40:59.576893+00:00; scope: Primary-source transcription and catalogue applicability audit; not human scientific review or independent experimental reproduction.
entity level: family
identity scope: Family/method identity only; no undocumented checkpoint equivalence.

Related records

variant of: FLARE [MSAlign v2]

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