SPANR (SPIDEX)
Splicing-regulatory model of Xiong et al.; scores distributed as SPIDEX precomputed delta-PSI.
Results are recorded on linked configurations and versions of this method. Their settings and evaluations are kept separate below.
Results on linked records
This method has no results of its own in this release. 3 linked records have results. They are not assigned to the underlying method: each record keeps its own settings and evaluations, and its scores are on its own page.
- Spidex (Riepe et al. 2021) Configuration · configuration of this method · 2 evaluations · 22 results
- SPANR (Smith and Kitzman 2023) Configuration · configuration of this method · 6 evaluations · 22 results
- SPANR (legacy) (Znabu et al. 2026) Configuration · configuration of this method · 1 evaluation · 3 results
Overview
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How it works, versions and access
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Evidence
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Evidence table
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Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
3 source records and release history
- Benchmarking splice variant prediction algorithms using massively parallel splicing assays · Original source · Genome Biology 24:294, published 2023-12-21; PMC10734170 full-text XML
- Benchmarking deep learning splice prediction tools using functional splice assays · Original source · Human Mutation 42(7):799, published online 2021-05-20; PMC8360004 full-text XML
- A Reproducible MFASS Benchmark of Splice-Disruption Predictors Reveals a Shared Exon-Interior Blind Spot · Original source · bioRxiv 2026.07.21.739871 v1, posted 2026-07-26; full-text PDF
Technical metadata and extraction receipts
Stable ID: splicing-follow-up-20261009-method-spanr
- areas
- dna-genomes
- contexts
- research
- method types
- supervised_machine_learning
- reported name
- SPANR (SPIDEX)
- entity level
- method
- source locator
- Smith and Kitzman Results 'Comparing bioinformatic predictions with MPSA measured effects' and Methods 'Scoring with eight splice effect predictors'; Riepe et al. Table 1 and Methods 'In silico splice prediction tools'; Znabu et al. Section 3 'Predictors and scoring'
- missing metadata
- version: reason: inapplicable; note: Family record; versions are on configurations
Related records
- configuration of: Spidex (Riepe et al. 2021)
- configuration of: SPANR (Smith and Kitzman 2023)
- configuration of: SPANR (legacy) (Znabu et al. 2026)