SPANR (SPIDEX)
Splicing-regulatory model of Xiong et al.; scores distributed as SPIDEX precomputed delta-PSI.
No reviewed evaluations are linked here in this release. See the sources and separately identified configurations below.
Overview
Splicing-regulatory model of Xiong et al.; scores distributed as SPIDEX precomputed delta-PSI.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
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Source checking is not independent reproduction. Release 2026-10-10-7fcc3e48a123.
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Evidence
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Evidence table
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Sources and history
Release 2026-10-10-7fcc3e48a123 · Record review: source checked
3 source records and release history
- Benchmarking splice variant prediction algorithms using massively parallel splicing assays · Original source · Genome Biology 24:294, published 2023-12-21; PMC10734170 full-text XML
- Benchmarking deep learning splice prediction tools using functional splice assays · Original source · Human Mutation 42(7):799, published online 2021-05-20; PMC8360004 full-text XML
- A Reproducible MFASS Benchmark of Splice-Disruption Predictors Reveals a Shared Exon-Interior Blind Spot · Original source · bioRxiv 2026.07.21.739871 v1, posted 2026-07-26; full-text PDF
Technical metadata and extraction receipts
Stable ID: splicing-follow-up-20261009-method-spanr
- areas
- dna-genomes
- contexts
- research
- method types
- supervised_machine_learning
- reported name
- SPANR (SPIDEX)
- entity level
- method
- source locator
- Smith and Kitzman Results 'Comparing bioinformatic predictions with MPSA measured effects' and Methods 'Scoring with eight splice effect predictors'; Riepe et al. Table 1 and Methods 'In silico splice prediction tools'; Znabu et al. Section 3 'Predictors and scoring'
- missing metadata
- version: reason: inapplicable; note: Family record; versions are on configurations
Related records
- configuration of: Spidex (Riepe et al. 2021)
- configuration of: SPANR (Smith and Kitzman 2023)
- configuration of: SPANR (legacy) (Znabu et al. 2026)