PerturBench evaluation of Decoder on covariate transfer on Srivatsan20, RMSE mean rank, scored with RMSE mean rank.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Decoder | Task: PerturBench CT-RMSE-RANK: covariate transfer on Srivatsan20, RMSE mean rank Dataset subset: Srivatsan20 (PerturBench split) | 0.14 ± 7 × 10 − 3 Perturbench RMSE rank fraction · lower Uncertainty: SD 0.007 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDecoder on PerturBench CT-RMSE-RANK: covariate transfer on Srivatsan20, RMSE mean rank Train on some cell types and predict drug effects in a held-out cell type, reported as the mean and one standard deviation over seeds. Aggregation: Not reported PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis · Table 2, row(Decoder), column(RMSE, mean rank) |
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Train on some cell types and predict drug effects in a held-out cell type, reported as the mean and one standard deviation over seeds.
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10 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Comparison: metric implementation RMSE mean rank Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder), column(RMSE, mean rank) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Comparison: protocol id perturbench-task-ct-rmse-rank Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder), column(RMSE, mean rank) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Origin author_reported Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder), column(RMSE, mean rank) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Protocol Train on some cell types and predict drug effects in a held-out cell type, reported as the mean and one standard deviation over seeds. Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder), column(RMSE, mean rank) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Source location Table 2, row(Decoder), column(RMSE, mean rank) Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder), column(RMSE, mean rank) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Description PerturBench evaluation of Decoder on covariate transfer on Srivatsan20, RMSE mean rank, scored with RMSE mean rank. Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder), column(RMSE, mean rank) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: assessment perturbench-task-ct-rmse-rank Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder), column(RMSE, mean rank) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: data perturbench-dataset-srivatsan20 Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder), column(RMSE, mean rank) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: system perturbench-method-decoder Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder), column(RMSE, mean rank) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Name Decoder on PerturBench CT-RMSE-RANK: covariate transfer on Srivatsan20, RMSE mean rank Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder), column(RMSE, mean rank) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
Stable ID: perturbench-evaluation-decoder-ct-rmse-rank