PerturBench evaluation of Decoder (Cov) on covariate transfer on Srivatsan20, RMSE of the mean, scored with RMSE of the mean.
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1 evaluation · 1 result. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Decoder (Cov) | Task: PerturBench CT-RMSE: covariate transfer on Srivatsan20, RMSE of the mean Dataset subset: Srivatsan20 (PerturBench split) | 0.023 ± 3 × 10 − 5 rmse_mean error · lower Uncertainty: type: standard_deviation; value: 0.00003 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDecoder (Cov) on PerturBench CT-RMSE: covariate transfer on Srivatsan20, RMSE of the mean Train on some cell types and predict drug effects in a held-out cell type, reported as the mean and one standard deviation over seeds. Aggregation: Not reported PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis · Table 2, row(Decoder (Cov)), column(RMSE, mean) |
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Train on some cell types and predict drug effects in a held-out cell type, reported as the mean and one standard deviation over seeds.
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10 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation RMSE of the mean Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder (Cov)), column(RMSE, mean) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id perturbench-task-ct-rmse Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder (Cov)), column(RMSE, mean) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder (Cov)), column(RMSE, mean) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol Train on some cell types and predict drug effects in a held-out cell type, reported as the mean and one standard deviation over seeds. Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder (Cov)), column(RMSE, mean) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator Table 2, row(Decoder (Cov)), column(RMSE, mean) Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder (Cov)), column(RMSE, mean) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description PerturBench evaluation of Decoder (Cov) on covariate transfer on Srivatsan20, RMSE of the mean, scored with RMSE of the mean. Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder (Cov)), column(RMSE, mean) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: benchmark perturbench-task-ct-rmse Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder (Cov)), column(RMSE, mean) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: dataset perturbench-dataset-srivatsan20 Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder (Cov)), column(RMSE, mean) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: model perturbench-method-decoder-cov Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder (Cov)), column(RMSE, mean) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name Decoder (Cov) on PerturBench CT-RMSE: covariate transfer on Srivatsan20, RMSE of the mean Context-only references | PerturBench: Benchmarking Machine Learning Models for Cellular Perturbation Analysis Table 2, row(Decoder (Cov)), column(RMSE, mean) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: perturbench-evaluation-decoder-cov-ct-rmse