mRNABench variant probes evaluation of evo-1–131k-base on eCLIP binding site prediction, scored with AUPRC.
These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.
Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified
Exact outcomes, predictions, identifiers and evaluator are connected.
Missing or unresolved evidence
Verified: Not verified
Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.
Missing or unresolved evidence
Verified: Not verified
A pinned recipe describes the inputs, environment and resource requirements.
Missing or unresolved evidence
Verified: Not verified
Separate data and exposure records support an independent test.
Missing or unresolved evidence
Verified: Not verified
Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.
No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.
1 evaluation · 1 result. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Pipeline: evo-1–131k-base | Protocol: mRNABench variant probes eCLIP: eCLIP binding site prediction Dataset subset: mRNABench eCLIP (mRNABench split) | 0.267 ± 0.003 auprc fraction · higher Uncertainty: type: confidence_interval; confidence level: 0.95; reported half width: 0.003; aggregation: mean over ten random splits (table caption wording) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceevo-1–131k-base on mRNABench variant probes eCLIP: eCLIP binding site prediction Frozen transcript representations with task-specific linear probes, or named supervised/naive controls. Homology splits where possible; random splits for MRL-MPRA, MRL-HL-Pair and VEP. Reported mean over ten splits; Appendix C enumerates nine seeds. Table captions say ten random splits, while Methods specify homology splits where possible. This source ambiguity and the nine explicitly listed seeds are retained; exact split manifests remain unextracted. Appendix C uses micro-averaged multilabel metrics. Aggregation: Not reported mRNABench: A curated benchmark for mature mRNA property and function prediction · Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base |
Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.
Frozen transcript representations with task-specific linear probes, or named supervised/naive controls. Homology splits where possible; random splits for MRL-MPRA, MRL-HL-Pair and VEP. Reported mean over ten splits; Appendix C enumerates nine seeds. Table captions say ten random splits, while Methods specify homology splits where possible. This source ambiguity and the nine explicitly listed seeds are retained; exact split manifests remain unextracted. Appendix C uses micro-averaged multilabel metrics.
Metadata review: source checked. Unreported conditions prevent automatic comparisons.
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
15 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.adaptation Frozen representations averaged over tokens after chunking, followed by task-specific linear probes; RidgeCV for regression, logistic regression for classification. Appendix C. Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.metric_implementation AUPRC Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id mrnabench-variants-2025-task-eclip Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.evidence_experiment_set_id mrnabench-2025-linear-probing-default-splits Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.evidence_overlap Same paper experiment set: mrnabench-2025-linear-probing-default-splits. Table 2 selects a best-overall variant per family from these measurements. Do not count the summary and per-variant tables as independent evidence. Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol Frozen transcript representations with task-specific linear probes, or named supervised/naive controls. Homology splits where possible; random splits for MRL-MPRA, MRL-HL-Pair and VEP. Reported mean over ten splits; Appendix C enumerates nine seeds. Table captions say ten random splits, while Methods specify homology splits where possible. This source ambiguity and the nine explicitly listed seeds are retained; exact split manifests remain unextracted. Appendix C uses micro-averaged multilabel metrics. Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.published_score_reproduction false Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.suite_complete false Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 5 (XML T2), data row 9, XML tr 11, column 4 (eCLIP | AUPRC), model evo-1–131k-base Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
View linked audit checks and correction history
Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: mrnabench-variants-2025-evaluation-evo-1-131k-base-eclip