| Comparison: adaptation Default settings, no retraining; top-ranked of five models Context-only references | Limits of deep-learning-based RNA prediction methods Original source ↗ Table 5, row 'Boltz-1', column 'DockQ' Version: Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML Retrieved: 2026-10-11T21:27:03Z | not individually reviewed No individual claim review recorded independent paper Audit detailsField: attributes.comparison.adaptation Source artifact SHA-256: 02043b4a3edbb62101f6abbca56c896a63fa5c7dc0c3956c58164daff015ad1f Hash scope: Hash scope not separately documented; inspect source record Inspected artifact |
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| Comparison: aggregation Mean over targets Context-only references | Limits of deep-learning-based RNA prediction methods Original source ↗ Table 5, row 'Boltz-1', column 'DockQ' Version: Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML Retrieved: 2026-10-11T21:27:03Z | not individually reviewed No individual claim review recorded independent paper Audit detailsField: attributes.comparison.aggregation Source artifact SHA-256: 02043b4a3edbb62101f6abbca56c896a63fa5c7dc0c3956c58164daff015ad1f Hash scope: Hash scope not separately documented; inspect source record Inspected artifact |
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| Comparison: budget Not reported Context-only references | Limits of deep-learning-based RNA prediction methods Original source ↗ Table 5, row 'Boltz-1', column 'DockQ' Version: Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML Retrieved: 2026-10-11T21:27:03Z | missing or unspecified No individual claim review recorded independent paper Audit detailsField: attributes.comparison.budget Source artifact SHA-256: 02043b4a3edbb62101f6abbca56c896a63fa5c7dc0c3956c58164daff015ad1f Hash scope: Hash scope not separately documented; inspect source record Inspected artifact |
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| Comparison: dataset version PDB after training cut-offs, downloaded January 2026 Context-only references | Limits of deep-learning-based RNA prediction methods Original source ↗ Table 5, row 'Boltz-1', column 'DockQ' Version: Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML Retrieved: 2026-10-11T21:27:03Z | not individually reviewed No individual claim review recorded independent paper Audit detailsField: attributes.comparison.dataset_version Source artifact SHA-256: 02043b4a3edbb62101f6abbca56c896a63fa5c7dc0c3956c58164daff015ad1f Hash scope: Hash scope not separately documented; inspect source record Inspected artifact |
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| Comparison: inputs Sequence plus shared externally supplied MSAs where the method accepts them Context-only references | Limits of deep-learning-based RNA prediction methods Original source ↗ Table 5, row 'Boltz-1', column 'DockQ' Version: Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML Retrieved: 2026-10-11T21:27:03Z | not individually reviewed No individual claim review recorded independent paper Audit detailsField: attributes.comparison.inputs Source artifact SHA-256: 02043b4a3edbb62101f6abbca56c896a63fa5c7dc0c3956c58164daff015ad1f Hash scope: Hash scope not separately documented; inspect source record Inspected artifact |
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| Comparison: metric implementation DockQ (overall score averaged over interfaces) Context-only references | Limits of deep-learning-based RNA prediction methods Original source ↗ Table 5, row 'Boltz-1', column 'DockQ' Version: Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML Retrieved: 2026-10-11T21:27:03Z | not individually reviewed No individual claim review recorded independent paper Audit detailsField: attributes.comparison.metric_implementation Source artifact SHA-256: 02043b4a3edbb62101f6abbca56c896a63fa5c7dc0c3956c58164daff015ad1f Hash scope: Hash scope not separately documented; inspect source record Inspected artifact |
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| Comparison: population Not reported Context-only references | Limits of deep-learning-based RNA prediction methods Original source ↗ Table 5, row 'Boltz-1', column 'DockQ' Version: Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML Retrieved: 2026-10-11T21:27:03Z | missing or unspecified No individual claim review recorded independent paper Audit detailsField: attributes.comparison.population Source artifact SHA-256: 02043b4a3edbb62101f6abbca56c896a63fa5c7dc0c3956c58164daff015ad1f Hash scope: Hash scope not separately documented; inspect source record Inspected artifact |
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| Comparison: protocol id lit-rna-20261011-rna3d-protocol-complex-hard-mean-dockq Context-only references | Limits of deep-learning-based RNA prediction methods Original source ↗ Table 5, row 'Boltz-1', column 'DockQ' Version: Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML Retrieved: 2026-10-11T21:27:03Z | not individually reviewed No individual claim review recorded independent paper Audit detailsField: attributes.comparison.protocol_id Source artifact SHA-256: 02043b4a3edbb62101f6abbca56c896a63fa5c7dc0c3956c58164daff015ad1f Hash scope: Hash scope not separately documented; inspect source record Inspected artifact |
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| Comparison: split Hard Context-only references | Limits of deep-learning-based RNA prediction methods Original source ↗ Table 5, row 'Boltz-1', column 'DockQ' Version: Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML Retrieved: 2026-10-11T21:27:03Z | not individually reviewed No individual claim review recorded independent paper Audit detailsField: attributes.comparison.split Source artifact SHA-256: 02043b4a3edbb62101f6abbca56c896a63fa5c7dc0c3956c58164daff015ad1f Hash scope: Hash scope not separately documented; inspect source record Inspected artifact |
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| Origin independent_paper Context-only references | Limits of deep-learning-based RNA prediction methods Original source ↗ Table 5, row 'Boltz-1', column 'DockQ' Version: Nucleic Acids Research 2026, gkag813 (issue date 2026-08-01); PMC13501138 full-text XML Retrieved: 2026-10-11T21:27:03Z | not individually reviewed No individual claim review recorded independent paper Audit detailsField: attributes.origin Source artifact SHA-256: 02043b4a3edbb62101f6abbca56c896a63fa5c7dc0c3956c58164daff015ad1f Hash scope: Hash scope not separately documented; inspect source record Inspected artifact |
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