HEST-Benchmark evaluation of CONCH on Gene expression prediction from histology, Prostate adenocarcinoma, scored with Pearson correlation.
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Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified
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1 evaluation · 1 result. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: CONCH | Task: HEST-Benchmark PRAD: Gene expression prediction from histology, Prostate adenocarcinoma Dataset subset: HEST-Benchmark PRAD (HEST-Benchmark split) | 0.373 ±0.03 pearson_r correlation · higher Uncertainty: type: standard_deviation; value: 0.03 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCONCH on HEST-Benchmark PRAD: Gene expression prediction from histology, Prostate adenocarcinoma Random Forest regression with 70 trees over frozen patch features, averaged over folds or patients. Aggregation: Not reported HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis · Table 1, row(PRAD), column(CONCH) |
Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.
Random Forest regression with 70 trees over frozen patch features, averaged over folds or patients.
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10 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation Pearson correlation Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(PRAD), column(CONCH) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id hest-task-prad Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(PRAD), column(CONCH) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(PRAD), column(CONCH) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol Random Forest regression with 70 trees over frozen patch features, averaged over folds or patients. Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(PRAD), column(CONCH) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator Table 1, row(PRAD), column(CONCH) Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(PRAD), column(CONCH) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description HEST-Benchmark evaluation of CONCH on Gene expression prediction from histology, Prostate adenocarcinoma, scored with Pearson correlation. Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(PRAD), column(CONCH) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: benchmark hest-task-prad Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(PRAD), column(CONCH) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: dataset hest-dataset-hest-benchmark-prad Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(PRAD), column(CONCH) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: model hest-method-conch Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(PRAD), column(CONCH) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name CONCH on HEST-Benchmark PRAD: Gene expression prediction from histology, Prostate adenocarcinoma Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(PRAD), column(CONCH) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: hest-evaluation-conch-prad