HEST-Benchmark evaluation of SimCLR histology encoder + random forest (HEST; Ciga et al.), cited as Ciga, on Gene expression prediction from histology, Rectum adenocarcinoma, scored with Pearson correlation.
The source table prints the tested method as Ciga. Evidence for this identity: SimCLR histology encoder + random forest (HEST; Ciga et al.)
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Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified
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1 evaluation · 1 result. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: SimCLR histology encoder + random forest (HEST; Ciga et al.) | Task: HEST-Benchmark READ: Gene expression prediction from histology, Rectum adenocarcinoma Dataset subset: HEST-Benchmark READ (HEST-Benchmark split) | 0.046 ±0.09 pearson_r correlation · higher Uncertainty: type: standard_deviation; value: 0.09 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceRandom Forest regression with 70 trees over frozen patch features, averaged over folds or patients. Aggregation: Not reported HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis · Table 1, row(READ), column(Ciga) |
Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.
Random Forest regression with 70 trees over frozen patch features, averaged over folds or patients.
Metadata review: source checked. Unreported conditions prevent automatic comparisons.
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16 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation Pearson correlation Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(READ), column(Ciga) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id hest-task-read Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(READ), column(Ciga) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(READ), column(Ciga) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol Random Forest regression with 70 trees over frozen patch features, averaged over folds or patients. Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(READ), column(Ciga) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_identity.display_name SimCLR histology encoder + random forest (HEST; Ciga et al.) on HEST-Benchmark READ: Gene expression prediction from histology, Rectum adenocarcinoma Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(READ), column(Ciga) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_identity.original_description HEST-Benchmark evaluation of Ciga on Gene expression prediction from histology, Rectum adenocarcinoma, scored with Pearson correlation. Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(READ), column(Ciga) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_identity.original_name Ciga on HEST-Benchmark READ: Gene expression prediction from histology, Rectum adenocarcinoma Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(READ), column(Ciga) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_identity.status resolved Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(READ), column(Ciga) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_identity.subject_id hest-method-ciga Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(READ), column(Ciga) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_label Ciga Context-only references | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(READ), column(Ciga) Version: Version pinned by URL and artifact SHA256 when available | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: hest-evaluation-ciga-read