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Evaluation

LucaOne on GENEB LINEAR-PROBE: Average macro-MCC across the 13 representative tasks, linear probe

GENEB evaluation of LucaOne on Average macro-MCC across the 13 representative tasks, linear probe, scored with Macro-MCC.

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Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified

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Verified: Not verified

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  • annotations: verification is missing
  • dependence: verification is missing

Verified: Not verified

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Evaluation results

1 evaluation · 1 result. Different protocols are not a single leaderboard.

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Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: LucaOneTask: GENEB LINEAR-PROBE: Average macro-MCC across the 13 representative tasks, linear probe
Dataset subset: GENEB representative task subset (GENEB split)
0.573 macro_mcc
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

LucaOne on GENEB LINEAR-PROBE: Average macro-MCC across the 13 representative tasks, linear probe

Frozen embeddings scored with a probe over the thirteen representative tasks, one from each functional category (Table 7).

Aggregation: Not reported

GENEB: Why Genomic Models Are Hard to Compare · Table 8, row(LucaOne), column(Linear MCC)

Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.

Evaluation procedure

Frozen embeddings scored with a probe over the thirteen representative tasks, one from each functional category (Table 7).

Configuration
LucaOne
Task
GENEB LINEAR-PROBE: Average macro-MCC across the 13 representative tasks, linear probe
Dataset subset
GENEB representative task subset (GENEB split)
origin
Author-reported evaluation
configuration
Not reported
protocol id
geneb-task-linear-probe
metric implementation
Macro-MCC

Metadata review: source checked. Unreported conditions prevent automatic comparisons.

Reproduction

Split
Not reported
Adaptation
Not reported
Scoring implementation
Macro-MCC

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

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Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

10 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
attributes.comparison.metric_implementation
Macro-MCC
Context-only references
GENEB: Why Genomic Models Are Hard to Compare

Original source ↗

Table 8, row(LucaOne), column(Linear MCC)

Version: 2606.04525v1
Retrieved: 2026-09-17T07:56:09.460928+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.metric_implementation

Source artifact SHA-256: 47975089c0ca738d5e2d6e6ea91cd4e7b80498c3f175803d8ec39ca77aa41629

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.comparison.protocol_id
geneb-task-linear-probe
Context-only references
GENEB: Why Genomic Models Are Hard to Compare

Original source ↗

Table 8, row(LucaOne), column(Linear MCC)

Version: 2606.04525v1
Retrieved: 2026-09-17T07:56:09.460928+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.protocol_id

Source artifact SHA-256: 47975089c0ca738d5e2d6e6ea91cd4e7b80498c3f175803d8ec39ca77aa41629

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.origin
author_reported
Context-only references
GENEB: Why Genomic Models Are Hard to Compare

Original source ↗

Table 8, row(LucaOne), column(Linear MCC)

Version: 2606.04525v1
Retrieved: 2026-09-17T07:56:09.460928+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.origin

Source artifact SHA-256: 47975089c0ca738d5e2d6e6ea91cd4e7b80498c3f175803d8ec39ca77aa41629

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.protocol
Frozen embeddings scored with a probe over the thirteen representative tasks, one from each functional category (Table 7).
Context-only references
GENEB: Why Genomic Models Are Hard to Compare

Original source ↗

Table 8, row(LucaOne), column(Linear MCC)

Version: 2606.04525v1
Retrieved: 2026-09-17T07:56:09.460928+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.protocol

Source artifact SHA-256: 47975089c0ca738d5e2d6e6ea91cd4e7b80498c3f175803d8ec39ca77aa41629

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.source_locator
Table 8, row(LucaOne), column(Linear MCC)
Context-only references
GENEB: Why Genomic Models Are Hard to Compare

Original source ↗

Table 8, row(LucaOne), column(Linear MCC)

Version: 2606.04525v1
Retrieved: 2026-09-17T07:56:09.460928+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 47975089c0ca738d5e2d6e6ea91cd4e7b80498c3f175803d8ec39ca77aa41629

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

description
GENEB evaluation of LucaOne on Average macro-MCC across the 13 representative tasks, linear probe, scored with Macro-MCC.
Context-only references
GENEB: Why Genomic Models Are Hard to Compare

Original source ↗

Table 8, row(LucaOne), column(Linear MCC)

Version: 2606.04525v1
Retrieved: 2026-09-17T07:56:09.460928+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: description

Source artifact SHA-256: 47975089c0ca738d5e2d6e6ea91cd4e7b80498c3f175803d8ec39ca77aa41629

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Relationship: benchmark
geneb-task-linear-probe
Context-only references
GENEB: Why Genomic Models Are Hard to Compare

Original source ↗

Table 8, row(LucaOne), column(Linear MCC)

Version: 2606.04525v1
Retrieved: 2026-09-17T07:56:09.460928+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: links:benchmark:geneb-task-linear-probe

Source artifact SHA-256: 47975089c0ca738d5e2d6e6ea91cd4e7b80498c3f175803d8ec39ca77aa41629

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Relationship: dataset
geneb-dataset-geneb-representative-task-subset
Context-only references
GENEB: Why Genomic Models Are Hard to Compare

Original source ↗

Table 8, row(LucaOne), column(Linear MCC)

Version: 2606.04525v1
Retrieved: 2026-09-17T07:56:09.460928+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: links:dataset:geneb-dataset-geneb-representative-task-subset

Source artifact SHA-256: 47975089c0ca738d5e2d6e6ea91cd4e7b80498c3f175803d8ec39ca77aa41629

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Relationship: model
geneb-method-lucaone
Context-only references
GENEB: Why Genomic Models Are Hard to Compare

Original source ↗

Table 8, row(LucaOne), column(Linear MCC)

Version: 2606.04525v1
Retrieved: 2026-09-17T07:56:09.460928+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: links:model:geneb-method-lucaone

Source artifact SHA-256: 47975089c0ca738d5e2d6e6ea91cd4e7b80498c3f175803d8ec39ca77aa41629

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

name
LucaOne on GENEB LINEAR-PROBE: Average macro-MCC across the 13 representative tasks, linear probe
Context-only references
GENEB: Why Genomic Models Are Hard to Compare

Original source ↗

Table 8, row(LucaOne), column(Linear MCC)

Version: 2606.04525v1
Retrieved: 2026-09-17T07:56:09.460928+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: name

Source artifact SHA-256: 47975089c0ca738d5e2d6e6ea91cd4e7b80498c3f175803d8ec39ca77aa41629

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: geneb-evaluation-lucaone-linear-probe

areas
dna-genomes
tasks
Average macro-MCC across the 13 representative tasks, linear probe
origin
author_reported
protocol
Frozen embeddings scored with a probe over the thirteen representative tasks, one from each functional category (Table 7).
comparison
protocol id: geneb-task-linear-probe; metric implementation: Macro-MCC
missing metadata
checkpoint revision: unreported; seeds: unreported; budget: unreported; split manifest: unextracted
source locator
Table 8, row(LucaOne), column(Linear MCC)
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