rewire.itbenchmarks
Evaluation

CAFA3 M037 · CAFA3 MFO all organisms; type1 no-knowledge; mode1 · CAFA3 final benchmark; MFO; all; type1; mode1

CAFA3 MFO all organisms; type1 no-knowledge; mode1; CAFA3 final benchmark; MFO; all; type1; mode1. Source checked, not independently reproduced.

Research readiness

These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.

Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

Exact outcomes, predictions, identifiers and evaluator are connected.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing

Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing
  • annotations: verification is missing
  • dependence: verification is missing

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • recipe pinned: verification is missing
  • resource estimate: verification is missing

Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • independent validation: verification is missing
  • overlap checked: verification is missing

Verified: Not verified

Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.

Artifacts and reproduction

No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Read reviewed discrepancy investigations

Evaluation results

1 evaluation · 1 result. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: CAFA3 M037Protocol: CAFA3 MFO all organisms; type1 no-knowledge; mode1 · CAFA3 final benchmark; MFO; all; type1; mode1
Dataset subset: CAFA3 final benchmark; MFO; all; type1; mode1
0.212 F1-max
fraction · higher

Uncertainty: kind: source_bootstrap_summary; printed sd: 0.011; printed mean: 0.214; note: Separate source Avg(B) and Std(B) columns; not a confidence interval on the printed F1-max.

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

CAFA3 M037 · CAFA3 MFO all organisms; type1 no-knowledge; mode1 · CAFA3 final benchmark; MFO; all; type1; mode1

CAFA3 MFO all organisms; type1 no-knowledge; mode1

Aggregation: source F1-max, not bootstrap mean

CAFA: Figshare 8135393 v3, file 17519846 · supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.

Evaluation procedure

CAFA3 MFO all organisms; type1 no-knowledge; mode1

Configuration
CAFA3 M037
Protocol
CAFA3 MFO all organisms; type1 no-knowledge; mode1 · CAFA3 final benchmark; MFO; all; type1; mode1
Dataset subset
CAFA3 final benchmark; MFO; all; type1; mode1
origin
Independent external evaluation
configuration
Not reported
protocol id
acquired-protocol-0841c618c0a89fa56f63
dataset version
Figshare 8135393 v3, file 17519846
split
CAFA3 final benchmark; MFO; all; type1; mode1
population
CAFA3 final benchmark; MFO; all; type1; mode1
inputs
unreported
adaptation
unreported
aggregation
metric-specific; inspect each result

Metadata review: discovered. Unreported conditions prevent automatic comparisons.

Reproduction

Split
CAFA3 final benchmark; MFO; all; type1; mode1
Adaptation
unreported
Scoring implementation
Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

23 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
attributes.comparison.adaptation
unreported
Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

missing or unspecified

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.adaptation

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.aggregation
metric-specific; inspect each result
Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.aggregation

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.dataset_version
Figshare 8135393 v3, file 17519846
Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.dataset_version

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.inputs
unreported
Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

missing or unspecified

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.inputs

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.population
CAFA3 final benchmark; MFO; all; type1; mode1
Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.population

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.protocol_id
acquired-protocol-0841c618c0a89fa56f63
Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.protocol_id

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.split
CAFA3 final benchmark; MFO; all; type1; mode1
Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.split

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.conditions.benchmark_type
type1 (no-knowledge, README definition)
Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.conditions.benchmark_type

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.conditions.coverage
1.00
Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.conditions.coverage

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.conditions.edition
CAFA3
Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.conditions.edition

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: discovered

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: acquired-evaluation-14062e97263ef38fa569

origin
independent_paper
protocol
CAFA3 MFO all organisms; type1 no-knowledge; mode1
source locator
supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 40; ID-model=M037; column F1-max
conditions
edition: CAFA3; ontology: MFO; benchmark type: type1 (no-knowledge, README definition); evaluation mode: mode1, numeric mode-to-protocol mapping not established by README; organisms: all; participant identity: Anonymized official submission code; no method identity inferred; coverage: 1.00; threshold: 0.44
comparison
protocol id: acquired-protocol-0841c618c0a89fa56f63; dataset version: Figshare 8135393 v3, file 17519846; split: CAFA3 final benchmark; MFO; all; type1; mode1; population: CAFA3 final benchmark; MFO; all; type1; mode1; inputs: unreported; adaptation: unreported; aggregation: metric-specific; inspect each result
missing metadata
checkpoint revision: unreported; scored count: unreported
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