rewirebio.iobenchmarks
Dataset subset

TDC.Caco2 (TDC ADMET benchmark group split)

The split of TDC.Caco2 that TDC ADMET benchmark group evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits.

Evaluation results

3 evaluations · 3 results. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Method: CNNTask: TDC ADMET benchmark group TDC-CACO2: Absorption: TDC.Caco2
Dataset subset: TDC.Caco2 (TDC ADMET benchmark group split)
0.446 ± 0.036 MAE
unit-unreported · lower

Uncertainty: ± 0.036 (type not stated)

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

CNN on TDC ADMET benchmark group TDC-CACO2: Absorption: TDC.Caco2

Scaffold split, as the ADMET benchmark group defines it. Table 4 reports a value and a plus-or-minus spread but does not identify the spread's statistical meaning.

Aggregation: Not reported

Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Development · Table 4, block(Absorption), row(CNN), column(TDC.Caco2)
Method: Morgan + MLPTask: TDC ADMET benchmark group TDC-CACO2: Absorption: TDC.Caco2
Dataset subset: TDC.Caco2 (TDC ADMET benchmark group split)
0.908 ± 0.060 MAE
unit-unreported · lower

Uncertainty: ± 0.060 (type not stated)

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Morgan + MLP on TDC ADMET benchmark group TDC-CACO2: Absorption: TDC.Caco2

Scaffold split, as the ADMET benchmark group defines it. Table 4 reports a value and a plus-or-minus spread but does not identify the spread's statistical meaning.

Aggregation: Not reported

Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Development · Table 4, block(Absorption), row(Morgan + MLP), column(TDC.Caco2)
Method: RDKit2D + MLPTask: TDC ADMET benchmark group TDC-CACO2: Absorption: TDC.Caco2
Dataset subset: TDC.Caco2 (TDC ADMET benchmark group split)
0.393 ± 0.024 MAE
unit-unreported · lower

Uncertainty: ± 0.024 (type not stated)

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

RDKit2D + MLP on TDC ADMET benchmark group TDC-CACO2: Absorption: TDC.Caco2

Scaffold split, as the ADMET benchmark group defines it. Table 4 reports a value and a plus-or-minus spread but does not identify the spread's statistical meaning.

Aggregation: Not reported

Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Development · Table 4, block(Absorption), row(RDKit2D + MLP), column(TDC.Caco2)

Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.

Research readiness

0 of 4 readiness checks met. These checks assess whether the evidence supports a reproducible investigation; a source-checked score alone does not meet them.

Readiness checks, gaps and artifacts

Release 2026-11-02-a7f03c9e55a5 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

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Missing or unresolved evidence

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  • File checksums match the recorded files: not yet verified
  • Predictions are matched to the right samples: not yet verified
  • Score meaning and direction are confirmed: not yet verified
  • Metrics are recomputed from the saved predictions: not yet verified

Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • File checksums match the recorded files: not yet verified
  • Predictions are matched to the right samples: not yet verified
  • Score meaning and direction are confirmed: not yet verified
  • Metrics are recomputed from the saved predictions: not yet verified
  • Sample annotations are recorded: not yet verified
  • Dependence between samples is assessed: not yet verified

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • File checksums match the recorded files: not yet verified
  • Predictions are matched to the right samples: not yet verified
  • Score meaning and direction are confirmed: not yet verified
  • A pinned run recipe exists: not yet verified
  • Compute requirements are estimated: not yet verified

Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • File checksums match the recorded files: not yet verified
  • Predictions are matched to the right samples: not yet verified
  • Score meaning and direction are confirmed: not yet verified
  • Independent validation data exist: not yet verified
  • Overlap with training data is checked: not yet verified

Verified: Not verified

Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.

Artifacts and reproduction

No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Subset and evaluation context

This record describes a particular subset or cohort used in an evaluation. Its results do not describe the full dataset.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

2 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statementOriginal source and locationReview and provenance
Description
The split of TDC.Caco2 that TDC ADMET benchmark group evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits.
Context-only references
Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Development

Original source ↗

No field-specific location recorded

Version: arXiv 2102.09548v1; later NSF v2 discovery retrieved partially but full artifact unavailable
Retrieved: 2026-09-16T21:04:55.709744+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: aaa5526f6f100093bc06c9921a8564ad08cfd5332270d614d7681051c2dd66bc

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Name
TDC.Caco2 (TDC ADMET benchmark group split)
Context-only references
Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Development

Original source ↗

No field-specific location recorded

Version: arXiv 2102.09548v1; later NSF v2 discovery retrieved partially but full artifact unavailable
Retrieved: 2026-09-16T21:04:55.709744+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: aaa5526f6f100093bc06c9921a8564ad08cfd5332270d614d7681051c2dd66bc

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: tdc-dataset-tdc-caco2

areas
molecular-interactions
missing metadata
url: reason: unextracted; version: reason: unreported
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