rewire.itbenchmarks
Dataset

AIDA v2 PBMC cohort

Research readiness

These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.

Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

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Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

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  • annotations: verification is missing
  • dependence: verification is missing

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
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Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
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Verified: Not verified

Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.

Artifacts and reproduction

No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Read reviewed discrepancy investigations

Evaluation results

2 evaluations · 2 results. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: Best frozen single-cell foundation modelTask: Donor-aware age-class prediction
Dataset: AIDA v2 PBMC cohort
0.322 Balanced accuracy
unitless · unknown

Uncertainty: ± 0.008 standard deviation

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

Best frozen single-cell foundation model: Donor-aware age-class prediction

Same donor-aware splits and logistic-regression probe as expression PCA; text names Geneformer as best model on AIDA v2.

Aggregation: Not reported

Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, scFM BA ± SD column
Configuration: Gene-expression PCATask: Donor-aware age-class prediction
Dataset: AIDA v2 PBMC cohort
0.384 Balanced accuracy
unitless · unknown

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

Gene-expression PCA: Donor-aware age-class prediction

Fifty-component gene-expression PCA with the same donor-aware probe splits.

Aggregation: Not reported

Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, Gene-expr BA column

Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.

Dataset and evaluation context

A dataset supplies biological observations. The evaluation protocol defines how those observations are split, used and scored.

Evidence

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Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

4 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
attributes.split
Not reported
Context-only references
Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing

Original source ↗

No field-specific location recorded

Version: PMC archival version PMC13407579.1
Retrieved: 2026-09-16T10:33:44.421Z

missing or unspecified

No individual claim review recorded

Audit details

Field: attributes.split

Source artifact SHA-256: d6cfb13933ceefed630954f804e7dc979b747bc4aec4c8c5518232f25772736a

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.version
622 donors
Context-only references
Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing

Original source ↗

No field-specific location recorded

Version: PMC archival version PMC13407579.1
Retrieved: 2026-09-16T10:33:44.421Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.version

Source artifact SHA-256: d6cfb13933ceefed630954f804e7dc979b747bc4aec4c8c5518232f25772736a

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

description
No value recorded
Context-only references
Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing

Original source ↗

No field-specific location recorded

Version: PMC archival version PMC13407579.1
Retrieved: 2026-09-16T10:33:44.421Z

missing or unspecified

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: d6cfb13933ceefed630954f804e7dc979b747bc4aec4c8c5518232f25772736a

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

name
AIDA v2 PBMC cohort
Context-only references
Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing

Original source ↗

No field-specific location recorded

Version: PMC archival version PMC13407579.1
Retrieved: 2026-09-16T10:33:44.421Z

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: d6cfb13933ceefed630954f804e7dc979b747bc4aec4c8c5518232f25772736a

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: needs review

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: reported-dataset-571ce000cd74b9

areas
cells-tissues
version
622 donors
split
Not reported
missing metadata
split: not_reported_in_legacy_extract; accession: not_reported_in_legacy_extract
entity classification
review date: 2026-09-17; rationale: This record identifies a biological data collection or source-labelled evaluation cohort. Keep its dataset identity; split, assay, taxonomic level, candidate restrictions and comparison context remain attributes rather than automatically becoming new entity kinds.; source ids: single-cell-aging-probes-2026; source locator: Methods: Datasets; Models, baselines and null calibrations; Age probe; cached text lines 13–22; ambiguities: None recorded
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