rewirebio.iobenchmarks
Dataset

LIT-PCBA five-target subset as scored by Shen et al. 2025

The five LIT-PCBA target sets with fewer than 100000 compounds each that Shen et al. 2025 screened.

Evaluation results

7 evaluations · 84 results. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
8.09 Enrichment factor (EF at the top 1% of the ranked library, averaged over the five targets)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'Average' (EF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0.089 Normalized enrichment factor (NEF at the top 1% of the ranked library, averaged over the five targets)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'Average' (NEF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
7.69 Enrichment factor (EF at the top 1% of the ranked library, LIT-PCBA target ESR_ago)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'ESR_ago' (EF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0.077 Normalized enrichment factor (NEF at the top 1% of the ranked library, LIT-PCBA target ESR_ago)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'ESR_ago' (NEF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
3.88 Enrichment factor (EF at the top 1% of the ranked library, LIT-PCBA target ESR_antago)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'ESR_antago' (EF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0.078 Normalized enrichment factor (NEF at the top 1% of the ranked library, LIT-PCBA target ESR_antago)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'ESR_antago' (NEF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
3.24 Enrichment factor (EF at the top 1% of the ranked library, LIT-PCBA target MAPK1)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'MAPK1' (EF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0.032 Normalized enrichment factor (NEF at the top 1% of the ranked library, LIT-PCBA target MAPK1)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'MAPK1' (NEF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
25.6 Enrichment factor (EF at the top 1% of the ranked library, LIT-PCBA target PPARG)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'PPARG' (EF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0.259 Normalized enrichment factor (NEF at the top 1% of the ranked library, LIT-PCBA target PPARG)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'PPARG' (NEF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0 Enrichment factor (EF at the top 1% of the ranked library, LIT-PCBA target TP53)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'TP53' (EF1%)
Configuration: Boltz-2 (ipTM) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0 Normalized enrichment factor (NEF at the top 1% of the ranked library, LIT-PCBA target TP53)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (ipTM) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (ipTM)', column 'TP53' (NEF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
9.3 Enrichment factor (EF at the top 1% of the ranked library, averaged over the five targets)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'Average' (EF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0.1 Normalized enrichment factor (NEF at the top 1% of the ranked library, averaged over the five targets)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'Average' (NEF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
15.4 Enrichment factor (EF at the top 1% of the ranked library, LIT-PCBA target ESR_ago)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'ESR_ago' (EF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0.154 Normalized enrichment factor (NEF at the top 1% of the ranked library, LIT-PCBA target ESR_ago)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'ESR_ago' (NEF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
2.91 Enrichment factor (EF at the top 1% of the ranked library, LIT-PCBA target ESR_antago)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'ESR_antago' (EF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0.059 Normalized enrichment factor (NEF at the top 1% of the ranked library, LIT-PCBA target ESR_antago)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'ESR_antago' (NEF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
2.59 Enrichment factor (EF at the top 1% of the ranked library, LIT-PCBA target MAPK1)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'MAPK1' (EF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0.026 Normalized enrichment factor (NEF at the top 1% of the ranked library, LIT-PCBA target MAPK1)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'MAPK1' (NEF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
25.6 Enrichment factor (EF at the top 1% of the ranked library, LIT-PCBA target PPARG)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'PPARG' (EF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0.259 Normalized enrichment factor (NEF at the top 1% of the ranked library, LIT-PCBA target PPARG)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'PPARG' (NEF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0 Enrichment factor (EF at the top 1% of the ranked library, LIT-PCBA target TP53)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'TP53' (EF1%)
Configuration: Boltz-2 (min-iPAE) as a screening scoreProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
0 Normalized enrichment factor (NEF at the top 1% of the ranked library, LIT-PCBA target TP53)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Boltz-2 (min-iPAE) on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Boltz-2 (min-iPAE)', column 'TP53' (NEF1%)
Configuration: Glide_SP docking baselineProtocol: LIT-PCBA five-target screening (Shen et al. 2025 Table 4)
Dataset: LIT-PCBA five-target subset as scored by Shen et al. 2025
6.79 Enrichment factor (EF at the top 1% of the ranked library, averaged over the five targets)
unitless · higher

Uncertainty: Not reported by the source: The source prints no interval or spread for this value

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Glide_SP on the LIT-PCBA five-target subset (Shen et al. 2025 Table 4)

hitdisc-20261022-protocol-shen-litpcba5

Aggregation: Not reported

Shen et al. 2025, Chemical Science (Europe PMC full text) · Table 4, row 'Glide_SP', column 'Average' (EF1%)

Source checking is not independent reproduction. Release 2026-10-22-1b7cf027e4f6.

Research readiness

0 of 4 readiness checks met. These checks assess whether the evidence supports a reproducible investigation; a source-checked score alone does not meet them.

Readiness checks, gaps and artifacts

Release 2026-10-22-1b7cf027e4f6 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

Exact outcomes, predictions, identifiers and evaluator are connected.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • File checksums match the recorded files: not yet verified
  • Predictions are matched to the right samples: not yet verified
  • Score meaning and direction are confirmed: not yet verified
  • Metrics are recomputed from the saved predictions: not yet verified

Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • File checksums match the recorded files: not yet verified
  • Predictions are matched to the right samples: not yet verified
  • Score meaning and direction are confirmed: not yet verified
  • Metrics are recomputed from the saved predictions: not yet verified
  • Sample annotations are recorded: not yet verified
  • Dependence between samples is assessed: not yet verified

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • File checksums match the recorded files: not yet verified
  • Predictions are matched to the right samples: not yet verified
  • Score meaning and direction are confirmed: not yet verified
  • A pinned run recipe exists: not yet verified
  • Compute requirements are estimated: not yet verified

Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • File checksums match the recorded files: not yet verified
  • Predictions are matched to the right samples: not yet verified
  • Score meaning and direction are confirmed: not yet verified
  • Independent validation data exist: not yet verified
  • Overlap with training data is checked: not yet verified

Verified: Not verified

Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.

Artifacts and reproduction

No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Dataset and evaluation context

A dataset supplies biological observations. The evaluation protocol defines how those observations are split, used and scored.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

14 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-22-1b7cf027e4f6
Property and statementOriginal source and locationReview and provenance
Population
Five target sets, each with fewer than 100000 compounds; actives and inactives both experimentally measured
Context-only references
LIT-PCBA official project page, drugdesign.unistra.fr

Original source ↗

Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Page as retrieved 2026-10-22; no version is printed on the page
Retrieved: 2026-10-22T12:01:54Z

not individually reviewed

No individual claim review recorded

Source has a recorded evidence concern. Consult its source page before using the claim.

Audit details

Field: attributes.population

Source artifact SHA-256: a2203612b553236d7f01da5573389d439d2f7aa0436080412f27da882e086e5e

Hash scope: This is a mutable web page: artifact_sha256 describes the single retrieval of 2026-10-22T12:01:54Z and a later change to the page would change it.

Population
Five target sets, each with fewer than 100000 compounds; actives and inactives both experimentally measured
Context-only references
Shen et al. 2025, Chemical Science (Europe PMC full text)

Original source ↗

Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC12704515 (Chem Sci, published 2025-12-11)
Retrieved: 2026-10-22T11:52:32Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.population

Source artifact SHA-256: 11a4cee97057d9e72f9393024d22fdd169e3134f493367eee2f7869facf9ccf8

Hash scope: Hash scope not separately documented; inspect source record

Source location
Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4
Context-only references
LIT-PCBA official project page, drugdesign.unistra.fr

Original source ↗

Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Page as retrieved 2026-10-22; no version is printed on the page
Retrieved: 2026-10-22T12:01:54Z

not individually reviewed

No individual claim review recorded

Source has a recorded evidence concern. Consult its source page before using the claim.

Audit details

Field: attributes.source_locator

Source artifact SHA-256: a2203612b553236d7f01da5573389d439d2f7aa0436080412f27da882e086e5e

Hash scope: This is a mutable web page: artifact_sha256 describes the single retrieval of 2026-10-22T12:01:54Z and a later change to the page would change it.

Source location
Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4
Context-only references
Shen et al. 2025, Chemical Science (Europe PMC full text)

Original source ↗

Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC12704515 (Chem Sci, published 2025-12-11)
Retrieved: 2026-10-22T11:52:32Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 11a4cee97057d9e72f9393024d22fdd169e3134f493367eee2f7869facf9ccf8

Hash scope: Hash scope not separately documented; inspect source record

Split
Five of the 15 target sets: ESR_ago, ESR_antago, PPARG, TP53 and MAPK1. MTORC1 meets the size criterion but was excluded because the binding sites in its recommended PDB structures are ambiguous.
Context-only references
LIT-PCBA official project page, drugdesign.unistra.fr

Original source ↗

Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Page as retrieved 2026-10-22; no version is printed on the page
Retrieved: 2026-10-22T12:01:54Z

not individually reviewed

No individual claim review recorded

Source has a recorded evidence concern. Consult its source page before using the claim.

Audit details

Field: attributes.split

Source artifact SHA-256: a2203612b553236d7f01da5573389d439d2f7aa0436080412f27da882e086e5e

Hash scope: This is a mutable web page: artifact_sha256 describes the single retrieval of 2026-10-22T12:01:54Z and a later change to the page would change it.

Split
Five of the 15 target sets: ESR_ago, ESR_antago, PPARG, TP53 and MAPK1. MTORC1 meets the size criterion but was excluded because the binding sites in its recommended PDB structures are ambiguous.
Context-only references
Shen et al. 2025, Chemical Science (Europe PMC full text)

Original source ↗

Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC12704515 (Chem Sci, published 2025-12-11)
Retrieved: 2026-10-22T11:52:32Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.split

Source artifact SHA-256: 11a4cee97057d9e72f9393024d22fdd169e3134f493367eee2f7869facf9ccf8

Hash scope: Hash scope not separately documented; inspect source record

Total targets
5
Context-only references
LIT-PCBA official project page, drugdesign.unistra.fr

Original source ↗

Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Page as retrieved 2026-10-22; no version is printed on the page
Retrieved: 2026-10-22T12:01:54Z

not individually reviewed

No individual claim review recorded

Source has a recorded evidence concern. Consult its source page before using the claim.

Audit details

Field: attributes.total_targets

Source artifact SHA-256: a2203612b553236d7f01da5573389d439d2f7aa0436080412f27da882e086e5e

Hash scope: This is a mutable web page: artifact_sha256 describes the single retrieval of 2026-10-22T12:01:54Z and a later change to the page would change it.

Total targets
5
Context-only references
Shen et al. 2025, Chemical Science (Europe PMC full text)

Original source ↗

Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC12704515 (Chem Sci, published 2025-12-11)
Retrieved: 2026-10-22T11:52:32Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.total_targets

Source artifact SHA-256: 11a4cee97057d9e72f9393024d22fdd169e3134f493367eee2f7869facf9ccf8

Hash scope: Hash scope not separately documented; inspect source record

Version
LIT-PCBA full data as distributed at https://drugdesign.unistra.fr/LIT-PCBA; no version string is printed
Context-only references
LIT-PCBA official project page, drugdesign.unistra.fr

Original source ↗

Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Page as retrieved 2026-10-22; no version is printed on the page
Retrieved: 2026-10-22T12:01:54Z

not individually reviewed

No individual claim review recorded

Source has a recorded evidence concern. Consult its source page before using the claim.

Audit details

Field: attributes.version

Source artifact SHA-256: a2203612b553236d7f01da5573389d439d2f7aa0436080412f27da882e086e5e

Hash scope: This is a mutable web page: artifact_sha256 describes the single retrieval of 2026-10-22T12:01:54Z and a later change to the page would change it.

Version
LIT-PCBA full data as distributed at https://drugdesign.unistra.fr/LIT-PCBA; no version string is printed
Context-only references
Shen et al. 2025, Chemical Science (Europe PMC full text)

Original source ↗

Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC12704515 (Chem Sci, published 2025-12-11)
Retrieved: 2026-10-22T11:52:32Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.version

Source artifact SHA-256: 11a4cee97057d9e72f9393024d22fdd169e3134f493367eee2f7869facf9ccf8

Hash scope: Hash scope not separately documented; inspect source record

How to read the evidence

Sources and history

Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

2 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: hitdisc-20261022-dataset-litpcba-5

areas
molecular-interactions
contexts
research
version
LIT-PCBA full data as distributed at https://drugdesign.unistra.fr/LIT-PCBA; no version string is printed
split
Five of the 15 target sets: ESR_ago, ESR_antago, PPARG, TP53 and MAPK1. MTORC1 meets the size criterion but was excluded because the binding sites in its recommended PDB structures are ambiguous.
population
Five target sets, each with fewer than 100000 compounds; actives and inactives both experimentally measured
total targets
5
source locator
Methods 'Datasets'; Results 'Performance on a subset of LIT-PCBA dataset'; Table 4
review
method: scope-review; automated-source-review; reviewer: claude; reviewer note: Claude review agent, independent of the extraction agent; no human review claimed; date: 2026-10-22; method note: Read the record against the pinned sources and against docs/use-cases.md and docs/record-contract.md.; note: Record checked against the pinned source and the record contract. Transcription checked; not reproduced and not reviewed by a human scientist.; artifact sha256: 11a4cee97057d9e72f9393024d22fdd169e3134f493367eee2f7869facf9ccf8; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12704515/fullTextXML; receipt: data/omics/use-case-coverage-hitdisc-20261022/review.json
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