rewirebio.iobenchmarks
Configuration

saseR-junctions (Segers et al.)

saseR on junction reads with the log total junction count per gene as offset.

1 evaluation · 12 results

Overview

saseR on junction reads with the log total junction count per gene as offset.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluations and results

1 evaluation · 12 results. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
7 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 3 ('MUC1344: TIMMDC1'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
1 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 4 ('MUC1350: CLPP'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
3 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 12 ('MUC1361: MCOLN1'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
2 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 2 ('MUC1365: TIMMDC1'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
3 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 10 ('MUC1393: PANK2'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
4 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 9 ('MUC1395: COASY'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
5840 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 1 ('MUC1396: MGST1'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
1 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 5 ('MUC1398: TAZ'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
3990 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 11 ('MUC1404: ALDH18A1'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
9 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 7 ('MUC1410: TALDO1'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
2780 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 6 ('MUC1436: TANGO2'), column 'Aberrant splicing: saseR junctions'
Configuration: saseR-junctions (Segers et al.)Protocol: Rank of known disease genes in 12 Kremer fibroblast RNA samples, aberrant splicing (Segers et al. Table 2)
Dataset: Kremer rare mitochondrial-disorder skin-fibroblast RNA cohort
5 known-gene-rank
unitless · lower

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Aberrant splicing: saseR junctions on 12 Kremer patients with known disease genes

rna-splicing-20261009-protocol-segers2026-kremer-splicing-rank

Aggregation: Not reported

saseR: juggling offsets unlocks RNA-seq tools for fast and scalable differential usage, aberrant splicing and expression retrieval · Table 2 row 8 ('X76624: SFXN4'), column 'Aberrant splicing: saseR junctions'

Source checking is not independent reproduction. Release 2026-10-09-ba02f2f4a36e.

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Evidence

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Release 2026-10-09-ba02f2f4a36e · Record review: source checked

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Technical metadata and extraction receipts

Stable ID: rna-splicing-20261009-config-segers2026-saser-junctions

areas
rna-transcriptomes
contexts
clinical_research
method types
conventional_pipeline
reported name
saseR-junctions (Segers et al.)
foundation model eligible
false
missing metadata
version: reason: unreported; note: No software version printed in the article or Additional file 1.
source locator
Table 2 column 'Aberrant splicing: saseR junctions'
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