DIAMOND pipeline 3A as run by an ENNGS laboratory (de Vries et al. 2021)
DIAMOND pipeline 3A as used at a participating diagnostic laboratory, with its own reference database and reporting criteria.
No reviewed evaluations are linked here in this release. See the sources and separately identified configurations below.
Overview
DIAMOND pipeline 3A as used at a participating diagnostic laboratory, with its own reference database and reporting criteria.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
0 evaluations · 0 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
No evaluations linked in this release.
Source checking is not independent reproduction. Release 2026-10-09-8cc1db47c7f9.
Use this model
How it works, versions and access
Strengths, limitations and unresolved questions
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
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Sources and history
Release 2026-10-09-8cc1db47c7f9 · Record review: source checked
2 source records and release history
- Benchmark of thirteen bioinformatic pipelines for metagenomic virus diagnostics using datasets from clinical samples · Original source · medRxiv 2021.05.04.21256618 version 1 (2021-05-08), JATS XML; published as J Clin Virol 141:104908 (doi:10.1016/j.jcv.2021.104908)
- de Vries et al. medRxiv preprint v1, Supplementary Tables 2-4 · Original source · medRxiv 2021.05.04.21256618 version 1, supplementary file media-1.xlsx (sheets SuppS2, SuppS3, SuppS4)
Technical metadata and extraction receipts
Stable ID: rna-pathogen-20261009-config-devries2021-diamond-pipeline-3a
- areas
- microbes-communities
- contexts
- clinical_research
- method types
- conventional_pipeline
- reported name
- DIAMOND pipeline 3A
- source locator
- Supplementary Table 2 cell A28; Methods 'Bioinformatic pipelines'
- foundation model eligible
- false
- missing metadata
- version: reason: unextracted; note: Pipeline details are in Table 1, which is an image in the preprint and was not transcribed
- parameters
- Own reference database and reporting criteria of the participating laboratory (Table 1, not transcribed)
Related records
- configuration of: DIAMOND