GENERator-Eukaryote-1.2B

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Evaluations and results

2 evaluations · 2 results. Different protocols are not a single leaderboard.

Dataset subset: GENEB representative task subset (GENEB split)

Sorted by Macro MCC (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.

Tested configuration	Protocol and dataset	Macro MCC
GENERator-Eukaryote-1.2BEvaluation	GENEB MLP-PROBE: Average macro-MCC across the 13 representative tasks, MLP probe	0.595 (best in column)
GENERator-Eukaryote-1.2BEvaluation	GENEB LINEAR-PROBE: Average macro-MCC across the 13 representative tasks, linear probe	0.579

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Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: GENERator-Eukaryote-1.2B	Task: GENEB LINEAR-PROBE: Average macro-MCC across the 13 representative tasks, linear probe Dataset subset: GENEB representative task subset (GENEB split)	0.579 Macro MCC unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source GENERator-Eukaryote-1.2B on GENEB LINEAR-PROBE: Average macro-MCC across the 13 representative tasks, linear probe Frozen embeddings scored with a probe over the thirteen representative tasks, one from each functional category (Table 7). Aggregation: Not reported GENEB: Why Genomic Models Are Hard to Compare · Table 8, row(GENERator-Eukaryote-1.2B), column(Linear MCC)
Configuration: GENERator-Eukaryote-1.2B	Task: GENEB MLP-PROBE: Average macro-MCC across the 13 representative tasks, MLP probe Dataset subset: GENEB representative task subset (GENEB split)	0.595 Macro MCC unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source GENERator-Eukaryote-1.2B on GENEB MLP-PROBE: Average macro-MCC across the 13 representative tasks, MLP probe Frozen embeddings scored with a probe over the thirteen representative tasks, one from each functional category (Table 7). Aggregation: Not reported GENEB: Why Genomic Models Are Hard to Compare · Table 8, row(GENERator-Eukaryote-1.2B), column(MLP MCC)

Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.

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Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

1 source record and release history

GENEB: Why Genomic Models Are Hard to Compare · Original source · 2606.04525v1

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Technical metadata and extraction receipts

Stable ID: geneb-method-generator-eukaryote-1-2b

areas: dna-genomes
source locator: Table 8, row(GENERator-Eukaryote-1.2B)
missing metadata: checkpoint revision: reason: unreported; parameters: reason: unextracted
provenance note: Genomic foundation model evaluated by the GENEB authors with frozen embeddings and a probe.

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