TREC 2020 PM run damoespcbh3 (ALIBABA)
Submitted run as evaluated by the track.
Overview
Submitted run as evaluated by the track.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
1 evaluation · 2 results. Different protocols are not a single leaderboard.
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Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: TREC 2020 PM run damoespcbh3 (ALIBABA) | Protocol: TREC 2020 PM Phase 2: evidence-tier-weighted ranking of retrieved abstracts Dataset: TREC 2020 Precision Medicine: 40 cancer-gene-treatment topics over a 2019 MEDLINE baseline snapshot | 0.452 ndcg unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourcedamoespcbh3 (ALIBABA), TREC 2020 PM Phase 2 egfrnsclc-20261009-protocol-trec2020-pm-phase2-evidence Aggregation: Not reported Overview of the TREC 2020 Precision Medicine Track; NIST TREC Browser, Precision Medicine 2020 runs page · Overview Table 6 (PDF page 9), block 'exp-gains', row 1: team 'ALIBABA', run 'damoespcbh3' |
| Configuration: TREC 2020 PM run damoespcbh3 (ALIBABA) | Protocol: TREC 2020 PM Phase 2: evidence-tier-weighted ranking of retrieved abstracts Dataset: TREC 2020 Precision Medicine: 40 cancer-gene-treatment topics over a 2019 MEDLINE baseline snapshot | 0.478 ndcg unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourcedamoespcbh3 (ALIBABA), TREC 2020 PM Phase 2 egfrnsclc-20261009-protocol-trec2020-pm-phase2-evidence Aggregation: Not reported Overview of the TREC 2020 Precision Medicine Track; NIST TREC Browser, Precision Medicine 2020 runs page · Overview Table 6 (PDF page 9), block 'std-gains', row 1: team 'ALIBABA', run 'damoespcbh3' |
Source checking is not independent reproduction. Release 2026-10-09-ba02f2f4a36e.
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How it works, versions and access
Strengths, limitations and unresolved questions
Evidence
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Evidence table
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Sources and history
Release 2026-10-09-ba02f2f4a36e · Record review: source checked
2 source records and release history
- Overview of the TREC 2020 Precision Medicine Track · Original source · Proceedings of the Twenty-Ninth Text REtrieval Conference (TREC 2020), NIST Special Publication 1266; 10-page PDF
- NIST TREC Browser, Precision Medicine 2020 runs page · Original source · usnistgov/trec-browser commit 75ec9339eac60126b1045e5858a5ac874ea54a51
Technical metadata and extraction receipts
Stable ID: egfrnsclc-20261009-config-trec2020-pm-damoespcbh3
- areas
- dna-genomes
- contexts
- clinical_research
- method types
- supervised_machine_learning
- reported name
- damoespcbh3
- foundation model eligible
- false
- source locator
- Overview Tables 5-6; TREC browser runs page, run damoespcbh3
- missing metadata
- version: reason: inapplicable; note: A submitted run is a fixed artifact; its MD5 is recorded where listed
- parameters
- Run type: manual. Run description as submitted: We expand each topic with field synonyms from Genetics Home Reference and use ElasticSearch to retrieve relevant PubMed documents. We utilize features including the ElasticSearch score, publication type, publication citation count, pre-trained BioBERT prediction and human-in-the-loop active learning with BioBERT to re-rank the retrieved documents. We pre-train BioBERT by previous data of previous TREC PM challenges. We use private annotations of relevance in the active learning process.
- limitations
- Manual run: human input in query formulation or relevance feedback (TREC browser run type).
- model identity note
- Run provenance: run_id damoespcbh3; run_file_md5 f1c0bb04af5eb1cf68f2f17547bf98d8; listed_in TREC browser runs page
Related records
- configuration of: TREC 2020 PM system of team ALIBABA
- system: damoespcbh3 (ALIBABA), TREC 2020 PM Phase 2