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HyenaDNA (zero-shot embedding)

DNA language model evaluated by the DART-Eval authors in the zero-shot embedding setting.

Overview

DNA language model evaluated by the DART-Eval authors in the zero-shot embedding setting.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluations and results

2 evaluations · 2 results. Different protocols are not a single leaderboard.

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Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: HyenaDNA (zero-shot embedding)	Task: DART-Eval VS-AFRICAN-AUROC: Variant scoring on Chromatin QTLs in African LCLs, AUROC Dataset subset: Chromatin QTLs in African LCLs (DART-Eval split)	0.515 auroc fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source HyenaDNA (zero-shot embedding) on DART-Eval VS-AFRICAN-AUROC: Variant scoring on Chromatin QTLs in African LCLs, AUROC Score the effect of a variant on chromatin accessibility, against the measured QTL call. Aggregation: Not reported DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 6, row(African HyenaDNA), column(zero-shot embedding auroc)
Configuration: HyenaDNA (zero-shot embedding)	Task: DART-Eval VS-YORUBAN-AUROC: Variant scoring on DNase QTLs in Yoruban LCLs, AUROC Dataset subset: DNase QTLs in Yoruban LCLs (DART-Eval split)	0.515 auroc fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source HyenaDNA (zero-shot embedding) on DART-Eval VS-YORUBAN-AUROC: Variant scoring on DNase QTLs in Yoruban LCLs, AUROC Score the effect of a variant on chromatin accessibility, against the measured QTL call. Aggregation: Not reported DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 6, row(Yoruban HyenaDNA), column(zero-shot embedding auroc)

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Evidence

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