ResNet
DNA language model whose frozen embeddings the BEND authors scored with a downstream head.
Overview
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Evaluations and results
2 evaluations · 2 results. Different protocols are not a single leaderboard.
Sorted by AUPRC (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.
| Tested configuration | Protocol and dataset | AUPRC | MCC |
|---|---|---|---|
| ResNetEvaluation | BEND ENHANCER: Enhancer annotation, Fulco 2019, Gasperini 2019 and Enformer enhancer set (BEND split) | 0.06 | Not reported |
| ResNetEvaluation | BEND GENE-FINDING: Gene finding, GENCODE (BEND split) | Not reported | 0.46 |
All 2 result rows with coverage, uncertainty and sources
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: ResNet | Task: BEND ENHANCER: Enhancer annotation Dataset subset: Fulco 2019, Gasperini 2019 and Enformer enhancer set (BEND split) | 0.06 AUPRC fraction · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceResNet on BEND ENHANCER: Enhancer annotation A downstream head trained on frozen embeddings, except for the expert methods and the fully supervised baselines, which are trained end to end. Metric and splits are from Table 1. Aggregation: Not reported BEND: Benchmarking DNA Language Models on Biologically Meaningful Tasks · Table 3, row(ResNet), column(Enhancer annotation) |
| Configuration: ResNet | Task: BEND GENE-FINDING: Gene finding Dataset subset: GENCODE (BEND split) | 0.46 MCC unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceResNet on BEND GENE-FINDING: Gene finding A downstream head trained on frozen embeddings, except for the expert methods and the fully supervised baselines, which are trained end to end. Metric and splits are from Table 1. Aggregation: Not reported BEND: Benchmarking DNA Language Models on Biologically Meaningful Tasks · Table 3, row(ResNet), column(Gene finding) |
Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.
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Evidence table
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Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
1 source record and release history
- BEND: Benchmarking DNA Language Models on Biologically Meaningful Tasks · Original source · Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Technical metadata and extraction receipts
Stable ID: bend-method-resnet
- areas
- dna-genomes
- source locator
- Table 3, row(ResNet)
- missing metadata
- checkpoint revision: reason: unreported; parameters: reason: unextracted