ProteinGym AMFR official zero-shot Spearman snapshot study membership
Primary source places this protocol within the linked study/suite; version-specific results remain separate.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
14 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.field links:part_of:discovery-benchmark-proteingym Context-only references | Protocol metadata evidence: proteingym-reference_files-DMS_substitutions.csv Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 144fe22b07dfaeec2b366f2346203a9838a55b4c | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.field links:part_of:discovery-benchmark-proteingym Context-only references | ProteinGym AMFR assay-level Spearman comparison Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 144fe22b07dfaeec2b366f2346203a9838a55b4c | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
attributes.limitations1 values
| Protocol metadata evidence: proteingym-reference_files-DMS_substitutions.csv Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 144fe22b07dfaeec2b366f2346203a9838a55b4c | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
attributes.limitations1 values
| ProteinGym AMFR assay-level Spearman comparison Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 144fe22b07dfaeec2b366f2346203a9838a55b4c | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.source_locator Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Context-only references | Protocol metadata evidence: proteingym-reference_files-DMS_substitutions.csv Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 144fe22b07dfaeec2b366f2346203a9838a55b4c | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.source_locator Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Context-only references | ProteinGym AMFR assay-level Spearman comparison Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 144fe22b07dfaeec2b366f2346203a9838a55b4c | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.value discovery-benchmark-proteingym Context-only references | Protocol metadata evidence: proteingym-reference_files-DMS_substitutions.csv Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 144fe22b07dfaeec2b366f2346203a9838a55b4c | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.value discovery-benchmark-proteingym Context-only references | ProteinGym AMFR assay-level Spearman comparison Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 144fe22b07dfaeec2b366f2346203a9838a55b4c | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| description Primary source places this protocol within the linked study/suite; version-specific results remain separate. Context-only references | Protocol metadata evidence: proteingym-reference_files-DMS_substitutions.csv Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 144fe22b07dfaeec2b366f2346203a9838a55b4c | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| description Primary source places this protocol within the linked study/suite; version-specific results remain separate. Context-only references | ProteinGym AMFR assay-level Spearman comparison Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 144fe22b07dfaeec2b366f2346203a9838a55b4c | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
View linked audit checks and correction history
Release 2026-09-30-e37e3ab1284d · Record review: source checked
2 source records and release history
- ProteinGym AMFR assay-level Spearman comparison · Original source · 144fe22b07dfaeec2b366f2346203a9838a55b4c
- Protocol metadata evidence: proteingym-reference_files-DMS_substitutions.csv · Original source · 144fe22b07dfaeec2b366f2346203a9838a55b4c
Technical metadata and extraction receipts
Stable ID: uc20260930-protocol-parent-fa51fe46268a4a99
- areas
- proteins-complexes
- field
- links:part_of:discovery-benchmark-proteingym
- value
- discovery-benchmark-proteingym
- source locator
- Official ProteinGym pinned benchmarks/DMS_zero_shot/substitutions/Spearman/DMS_substitutions_Spearman_DMS_level.csv; AMFR assay row
- review
- method: automated_source_review; reviewed at: 2026-09-30T21:44:09.612264+00:00; date: 2026-09-30; reviewer: Codex experimental-use-case curation; scope: Source-backed study/suite containment for navigation, not shared numerical comparison or execution.
- limitations
- Navigation relationship only; no numerical pooling, protocol equivalence or completed new experiment implied.