rewirebio.iobenchmarks
Evidence claim

scoring_population: tgtval-20261009-protocol-roohani2025-hitratio-round5

Descriptive fact transcribed from the pinned source.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

6 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-10-6e93f504adfc
Property and statementOriginal source and locationReview and provenance
attributes.field
scoring_population
Context-only references
BioDiscoveryAgent: An AI Agent for Designing Genetic Perturbation Experiments

Original source ↗

Section 5 (results, non-essential genes) and Table 1 caption

Version: arXiv:2405.17631 version 3, updated 2025-03-09; published as a conference paper at ICLR 2025
Retrieved: 2026-10-09T20:51:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: dd94d80ec75c9bb84ec3989c910a313ef1a7aec57c772d3dd35ecadd250132a7

Hash scope: pdftotext -layout text layer, parsed by extract/extract_target_validation.py

Inspected artifact

attributes.source_locator
Section 5 (results, non-essential genes) and Table 1 caption
Context-only references
BioDiscoveryAgent: An AI Agent for Designing Genetic Perturbation Experiments

Original source ↗

Section 5 (results, non-essential genes) and Table 1 caption

Version: arXiv:2405.17631 version 3, updated 2025-03-09; published as a conference paper at ICLR 2025
Retrieved: 2026-10-09T20:51:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: dd94d80ec75c9bb84ec3989c910a313ef1a7aec57c772d3dd35ecadd250132a7

Hash scope: pdftotext -layout text layer, parsed by extract/extract_target_validation.py

Inspected artifact

attributes.value
The 'N/E' columns count only non-essential genes among the hits. The source argues essential genes are likely to be detected as hits under many phenotypes, so the non-essential subset is the harder and more biologically useful task. The source does not print which gene list defines essentiality.
Context-only references
BioDiscoveryAgent: An AI Agent for Designing Genetic Perturbation Experiments

Original source ↗

Section 5 (results, non-essential genes) and Table 1 caption

Version: arXiv:2405.17631 version 3, updated 2025-03-09; published as a conference paper at ICLR 2025
Retrieved: 2026-10-09T20:51:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: dd94d80ec75c9bb84ec3989c910a313ef1a7aec57c772d3dd35ecadd250132a7

Hash scope: pdftotext -layout text layer, parsed by extract/extract_target_validation.py

Inspected artifact

description
Descriptive fact transcribed from the pinned source.
Context-only references
BioDiscoveryAgent: An AI Agent for Designing Genetic Perturbation Experiments

Original source ↗

Section 5 (results, non-essential genes) and Table 1 caption

Version: arXiv:2405.17631 version 3, updated 2025-03-09; published as a conference paper at ICLR 2025
Retrieved: 2026-10-09T20:51:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: dd94d80ec75c9bb84ec3989c910a313ef1a7aec57c772d3dd35ecadd250132a7

Hash scope: pdftotext -layout text layer, parsed by extract/extract_target_validation.py

Inspected artifact

Relationship: subject
tgtval-20261009-protocol-roohani2025-hitratio-round5
Context-only references
BioDiscoveryAgent: An AI Agent for Designing Genetic Perturbation Experiments

Original source ↗

Section 5 (results, non-essential genes) and Table 1 caption

Version: arXiv:2405.17631 version 3, updated 2025-03-09; published as a conference paper at ICLR 2025
Retrieved: 2026-10-09T20:51:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:tgtval-20261009-protocol-roohani2025-hitratio-round5

Source artifact SHA-256: dd94d80ec75c9bb84ec3989c910a313ef1a7aec57c772d3dd35ecadd250132a7

Hash scope: pdftotext -layout text layer, parsed by extract/extract_target_validation.py

Inspected artifact

name
scoring_population: tgtval-20261009-protocol-roohani2025-hitratio-round5
Context-only references
BioDiscoveryAgent: An AI Agent for Designing Genetic Perturbation Experiments

Original source ↗

Section 5 (results, non-essential genes) and Table 1 caption

Version: arXiv:2405.17631 version 3, updated 2025-03-09; published as a conference paper at ICLR 2025
Retrieved: 2026-10-09T20:51:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: dd94d80ec75c9bb84ec3989c910a313ef1a7aec57c772d3dd35ecadd250132a7

Hash scope: pdftotext -layout text layer, parsed by extract/extract_target_validation.py

Inspected artifact

Sources and history

Release 2026-10-10-6e93f504adfc · Record review: source checked

1 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: tgtval-20261009-claim-roohani2025-nonessential

field
scoring_population
value
The 'N/E' columns count only non-essential genes among the hits. The source argues essential genes are likely to be detected as hits under many phenotypes, so the non-essential subset is the harder and more biologically useful task. The source does not print which gene list defines essentiality.
source locator
Section 5 (results, non-essential genes) and Table 1 caption
review
method: source-hash-verification; ai-assisted-source-review; reviewer: claude; reviewer note: Separate Claude review agent, independent of the extractor; no human review claimed; reviewed at: 2026-10-09T21:22:54Z; artifact sha256: dd94d80ec75c9bb84ec3989c910a313ef1a7aec57c772d3dd35ecadd250132a7; retrieval url: https://arxiv.org/pdf/2405.17631v3; note: Hand transcription from the source text. Independent review 2026-10-09: checked against the re-downloaded PDF text; see docs/reviews/use-cases/therapeutic-target-validation-2026-10-09.md.
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