checkpoint: NeuSomatic configuration (Guille et al. 2025)
Descriptive fact transcribed from the pinned source.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
6 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.field checkpoint Context-only references | Guille et al. 2025, supplementary methods (caller command lines) Supplementary methods, section '#NeuSomatic', call.py command Version: supplementary_methods_bbae697.docx inside the Europe PMC supplementary files bundle for PMC11790059 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of supplementary_methods_bbae697.docx. Retrieved as one member of the Europe PMC supplementaryFiles zip. The zip is assembled per request (member timestamps equal the request time), so only the member file hash is pinned. Archive member: supplementary_methods_bbae697.docx |
| attributes.source_locator Supplementary methods, section '#NeuSomatic', call.py command Context-only references | Guille et al. 2025, supplementary methods (caller command lines) Supplementary methods, section '#NeuSomatic', call.py command Version: supplementary_methods_bbae697.docx inside the Europe PMC supplementary files bundle for PMC11790059 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of supplementary_methods_bbae697.docx. Retrieved as one member of the Europe PMC supplementaryFiles zip. The zip is assembled per request (member timestamps equal the request time), so only the member file hash is pinned. Archive member: supplementary_methods_bbae697.docx |
| attributes.value NeuSomatic was called with --checkpoint NeuSomatic_v0.1.4_standalone_SEQC-WGS-GT50-SpikeWGS10.pth. Context-only references | Guille et al. 2025, supplementary methods (caller command lines) Supplementary methods, section '#NeuSomatic', call.py command Version: supplementary_methods_bbae697.docx inside the Europe PMC supplementary files bundle for PMC11790059 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of supplementary_methods_bbae697.docx. Retrieved as one member of the Europe PMC supplementaryFiles zip. The zip is assembled per request (member timestamps equal the request time), so only the member file hash is pinned. Archive member: supplementary_methods_bbae697.docx |
| description Descriptive fact transcribed from the pinned source. Context-only references | Guille et al. 2025, supplementary methods (caller command lines) Supplementary methods, section '#NeuSomatic', call.py command Version: supplementary_methods_bbae697.docx inside the Europe PMC supplementary files bundle for PMC11790059 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of supplementary_methods_bbae697.docx. Retrieved as one member of the Europe PMC supplementaryFiles zip. The zip is assembled per request (member timestamps equal the request time), so only the member file hash is pinned. Archive member: supplementary_methods_bbae697.docx |
| Relationship: subject somatic-20261009-config-guille2025-neusomatic Context-only references | Guille et al. 2025, supplementary methods (caller command lines) Supplementary methods, section '#NeuSomatic', call.py command Version: supplementary_methods_bbae697.docx inside the Europe PMC supplementary files bundle for PMC11790059 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of supplementary_methods_bbae697.docx. Retrieved as one member of the Europe PMC supplementaryFiles zip. The zip is assembled per request (member timestamps equal the request time), so only the member file hash is pinned. Archive member: supplementary_methods_bbae697.docx |
| name checkpoint: NeuSomatic configuration (Guille et al. 2025) Context-only references | Guille et al. 2025, supplementary methods (caller command lines) Supplementary methods, section '#NeuSomatic', call.py command Version: supplementary_methods_bbae697.docx inside the Europe PMC supplementary files bundle for PMC11790059 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of supplementary_methods_bbae697.docx. Retrieved as one member of the Europe PMC supplementaryFiles zip. The zip is assembled per request (member timestamps equal the request time), so only the member file hash is pinned. Archive member: supplementary_methods_bbae697.docx |
Sources and history
Release 2026-10-09-ba02f2f4a36e · Record review: source checked
1 source records and release history
- Guille et al. 2025, supplementary methods (caller command lines) · Original source · supplementary_methods_bbae697.docx inside the Europe PMC supplementary files bundle for PMC11790059
Technical metadata and extraction receipts
Stable ID: somatic-20261009-claim-guille2025-neusomatic-checkpoint
- field
- checkpoint
- value
- NeuSomatic was called with --checkpoint NeuSomatic_v0.1.4_standalone_SEQC-WGS-GT50-SpikeWGS10.pth.
- source locator
- Supplementary methods, section '#NeuSomatic', call.py command
- review
- method: source-hash-verification; ai-assisted-source-review; reviewer: claude; reviewer note: Separate Claude review agent, independent of the extractor; no human review claimed; date: 2026-10-09; method note: Re-downloaded the supplementary zip, matched the DOCX member hash and read the '#NeuSomatic' command text with the reviewer's own parser.; artifact sha256: 222509b8ec4b47b0278d6ea504291dba07a615c2fa23e3aaef600ea6aaf39709; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC11790059/supplementaryFiles; note: Hand transcription from the supplementary methods DOCX text. Pending independent review. Independent review 2026-10-09: checkpoint path matches. Name corrected from 'training_overlap: ...' to match the field 'checkpoint'.