rewirebio.iobenchmarks
Evidence claim

population_detail: regulatory-variant-20261009-data-gschwind2026-heldout-crispr

Descriptive fact transcribed from the pinned source.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

12 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-10-6e93f504adfc
Property and statementOriginal source and locationReview and provenance
attributes.field
population_detail
Context-only references
An encyclopedia of human enhancer-gene regulatory interactions

Original source ↗

Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nature 657(8130):179, published online 2026-07-15; PMC13471189 full-text XML
Retrieved: 2026-10-09T21:03:18Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: df07ed8c37a62732ba0ae26b74a6c8bcb9b48540fefd03c064115d9a87a3b642

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.field
population_detail
Context-only references
Gschwind et al. 2026, Supplementary Table 3

Original source ↗

Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Supplementary_Table_3.xlsx in 41586_2026_10781_MOESM3_ESM.zip (folder 2023-11-20318B-s3) inside the Europe PMC supplementaryFiles zip
Retrieved: 2026-10-09T21:04:46Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 81f7f2a3c4379adfca9db362a3aa2c2a8b4121bed0a54337a747f9afeee85904

Hash scope: SHA-256 of the xlsx member. MOESM3 zip SHA-256 88eb6c5239019cbec55281b545a3b6e450e2a83384d067ca94a0974968428332; outer supplementaryFiles zip SHA-256 78dc8641d9c6861568465c274b80329f7046bf7a0145c2546deb422f9a2c0930 (assembled per request).

Inspected artifact

attributes.source_locator
Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1
Context-only references
An encyclopedia of human enhancer-gene regulatory interactions

Original source ↗

Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nature 657(8130):179, published online 2026-07-15; PMC13471189 full-text XML
Retrieved: 2026-10-09T21:03:18Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: df07ed8c37a62732ba0ae26b74a6c8bcb9b48540fefd03c064115d9a87a3b642

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.source_locator
Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1
Context-only references
Gschwind et al. 2026, Supplementary Table 3

Original source ↗

Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Supplementary_Table_3.xlsx in 41586_2026_10781_MOESM3_ESM.zip (folder 2023-11-20318B-s3) inside the Europe PMC supplementaryFiles zip
Retrieved: 2026-10-09T21:04:46Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 81f7f2a3c4379adfca9db362a3aa2c2a8b4121bed0a54337a747f9afeee85904

Hash scope: SHA-256 of the xlsx member. MOESM3 zip SHA-256 88eb6c5239019cbec55281b545a3b6e450e2a83384d067ca94a0974968428332; outer supplementaryFiles zip SHA-256 78dc8641d9c6861568465c274b80329f7046bf7a0145c2546deb422f9a2c0930 (assembled per request).

Inspected artifact

attributes.value
Held-out CRISPR data: 4,378 total E-G pairs and 190 (157.39 weighted) positives in K562, GM12878, HCT116, WTC11 and Jurkat cells, from eight CRISPR perturbation screens.
Context-only references
An encyclopedia of human enhancer-gene regulatory interactions

Original source ↗

Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nature 657(8130):179, published online 2026-07-15; PMC13471189 full-text XML
Retrieved: 2026-10-09T21:03:18Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: df07ed8c37a62732ba0ae26b74a6c8bcb9b48540fefd03c064115d9a87a3b642

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.value
Held-out CRISPR data: 4,378 total E-G pairs and 190 (157.39 weighted) positives in K562, GM12878, HCT116, WTC11 and Jurkat cells, from eight CRISPR perturbation screens.
Context-only references
Gschwind et al. 2026, Supplementary Table 3

Original source ↗

Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Supplementary_Table_3.xlsx in 41586_2026_10781_MOESM3_ESM.zip (folder 2023-11-20318B-s3) inside the Europe PMC supplementaryFiles zip
Retrieved: 2026-10-09T21:04:46Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: 81f7f2a3c4379adfca9db362a3aa2c2a8b4121bed0a54337a747f9afeee85904

Hash scope: SHA-256 of the xlsx member. MOESM3 zip SHA-256 88eb6c5239019cbec55281b545a3b6e450e2a83384d067ca94a0974968428332; outer supplementaryFiles zip SHA-256 78dc8641d9c6861568465c274b80329f7046bf7a0145c2546deb422f9a2c0930 (assembled per request).

Inspected artifact

description
Descriptive fact transcribed from the pinned source.
Context-only references
An encyclopedia of human enhancer-gene regulatory interactions

Original source ↗

Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nature 657(8130):179, published online 2026-07-15; PMC13471189 full-text XML
Retrieved: 2026-10-09T21:03:18Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: df07ed8c37a62732ba0ae26b74a6c8bcb9b48540fefd03c064115d9a87a3b642

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

description
Descriptive fact transcribed from the pinned source.
Context-only references
Gschwind et al. 2026, Supplementary Table 3

Original source ↗

Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Supplementary_Table_3.xlsx in 41586_2026_10781_MOESM3_ESM.zip (folder 2023-11-20318B-s3) inside the Europe PMC supplementaryFiles zip
Retrieved: 2026-10-09T21:04:46Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: 81f7f2a3c4379adfca9db362a3aa2c2a8b4121bed0a54337a747f9afeee85904

Hash scope: SHA-256 of the xlsx member. MOESM3 zip SHA-256 88eb6c5239019cbec55281b545a3b6e450e2a83384d067ca94a0974968428332; outer supplementaryFiles zip SHA-256 78dc8641d9c6861568465c274b80329f7046bf7a0145c2546deb422f9a2c0930 (assembled per request).

Inspected artifact

Relationship: subject
regulatory-variant-20261009-data-gschwind2026-heldout-crispr
Context-only references
An encyclopedia of human enhancer-gene regulatory interactions

Original source ↗

Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nature 657(8130):179, published online 2026-07-15; PMC13471189 full-text XML
Retrieved: 2026-10-09T21:03:18Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:regulatory-variant-20261009-data-gschwind2026-heldout-crispr

Source artifact SHA-256: df07ed8c37a62732ba0ae26b74a6c8bcb9b48540fefd03c064115d9a87a3b642

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: subject
regulatory-variant-20261009-data-gschwind2026-heldout-crispr
Context-only references
Gschwind et al. 2026, Supplementary Table 3

Original source ↗

Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Supplementary_Table_3.xlsx in 41586_2026_10781_MOESM3_ESM.zip (folder 2023-11-20318B-s3) inside the Europe PMC supplementaryFiles zip
Retrieved: 2026-10-09T21:04:46Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:regulatory-variant-20261009-data-gschwind2026-heldout-crispr

Source artifact SHA-256: 81f7f2a3c4379adfca9db362a3aa2c2a8b4121bed0a54337a747f9afeee85904

Hash scope: SHA-256 of the xlsx member. MOESM3 zip SHA-256 88eb6c5239019cbec55281b545a3b6e450e2a83384d067ca94a0974968428332; outer supplementaryFiles zip SHA-256 78dc8641d9c6861568465c274b80329f7046bf7a0145c2546deb422f9a2c0930 (assembled per request).

Inspected artifact

Sources and history

Release 2026-10-10-6e93f504adfc · Record review: source checked

2 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: regulatory-variant-20261009-claim-gschwind2026-heldout-composition

field
population_detail
value
Held-out CRISPR data: 4,378 total E-G pairs and 190 (157.39 weighted) positives in K562, GM12878, HCT116, WTC11 and Jurkat cells, from eight CRISPR perturbation screens.
source locator
Figure 2 legend panel d; Methods 'Creating the combined held-out CRISPR dataset' paragraph 1
review
method: source-hash-verification; ai-assisted-source-review; method note: Re-downloaded the article XML, matched its SHA-256 and read the cited paragraphs with the reviewer's own JATS text extractor.; reviewer: claude; reviewer note: Separate Claude review agent, independent of the extractor; no human review claimed; date: 2026-10-09; artifact sha256: df07ed8c37a62732ba0ae26b74a6c8bcb9b48540fefd03c064115d9a87a3b642; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13471189/fullTextXML; note: Hand transcription from the article text. Pending independent review. Independent review 2026-10-09: Figure 2 legend panel d and Methods paragraph match.
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