Optimus 5-Prime: description
Description of Optimus 5-Prime
Convolutional neural network that predicts mean ribosome load from 5' UTR sequence, trained on massively parallel reporter assays of random 5' UTRs and limited by position-specific weights to the lengths seen in training.
Replace a placeholder or provenance description with a sourced functional description (issue #88a). Historical releases retain the original value.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
7 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Claimed field description Context-only references | FramePool 2021 primary article uc20260930-source-framepool-2021: Abstract; Introduction paragraphs 5-7 Version: 2021 journal article XML; PMC8136849.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Previous value Named prediction model family identified in the cited primary source. Exact fitted configurations and scores are separate records. Context-only references | FramePool 2021 primary article uc20260930-source-framepool-2021: Abstract; Introduction paragraphs 5-7 Version: 2021 journal article XML; PMC8136849.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Source location uc20260930-source-framepool-2021: Abstract; Introduction paragraphs 5-7 Context-only references | FramePool 2021 primary article uc20260930-source-framepool-2021: Abstract; Introduction paragraphs 5-7 Version: 2021 journal article XML; PMC8136849.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Claimed value Convolutional neural network that predicts mean ribosome load from 5' UTR sequence, trained on massively parallel reporter assays of random 5' UTRs and limited by position-specific weights to the lengths seen in training. Context-only references | FramePool 2021 primary article uc20260930-source-framepool-2021: Abstract; Introduction paragraphs 5-7 Version: 2021 journal article XML; PMC8136849.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Description Replace a placeholder or provenance description with a sourced functional description (issue #88a). Historical releases retain the original value. Context-only references | FramePool 2021 primary article uc20260930-source-framepool-2021: Abstract; Introduction paragraphs 5-7 Version: 2021 journal article XML; PMC8136849.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Relationship: subject uc20260930-model-optimus-5-prime Context-only references | FramePool 2021 primary article uc20260930-source-framepool-2021: Abstract; Introduction paragraphs 5-7 Version: 2021 journal article XML; PMC8136849.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Name Optimus 5-Prime: description Context-only references | FramePool 2021 primary article uc20260930-source-framepool-2021: Abstract; Introduction paragraphs 5-7 Version: 2021 journal article XML; PMC8136849.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
1 source record and release history
- FramePool 2021 primary article · Original source · 2021 journal article XML; PMC8136849.1
Technical metadata and extraction receipts
Stable ID: metadata-correction-01bf5de6ca7da933d8a8
- areas
- rna-transcriptomes
- field
- description
- previous value
- Named prediction model family identified in the cited primary source. Exact fitted configurations and scores are separate records.
- value
- Convolutional neural network that predicts mean ribosome load from 5' UTR sequence, trained on massively parallel reporter assays of random 5' UTRs and limited by position-specific weights to the lengths seen in training.
- source locator
- uc20260930-source-framepool-2021: Abstract; Introduction paragraphs 5-7
- review
- method: automated-source-review; ai-assisted-source-review; reviewer: claude; reviewer note: Extractor: Claude research agent for issue #88a. Reviewer: separate Claude review agent, independent of the extractor; no human review claimed; date: 2026-10-10; method note: Compared the description with the cited source text (abstract, README row, benchmark CSV header or full-text section) of re-downloaded artifacts, and previous_value with origin/main.; note: Description written from the cited source text; provenance text was generic and is kept here as previous_value. Independent review 2026-10-10: every stated fact is supported by the cited text.
Related records
- subject: Optimus 5-Prime